Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3729g00059 ATGTCTTCTGATCTCTATACTTTTGATATTCCTATCCACCGACATTCAAGGCCAGACACAGTCTCCTATGATGGAAGCGGAGATCACATGTTTTTCTCTGATCCTTACCATTCCCCTTTCTTCAATGTCTCTCCCATTGATGTAGCTCGAGACAATTTGAACAATTCTCATGACCCGTTTTCCCCTTTTTCTCCTCAGATTACCCACTTGGAAAACCAGAGCCTATATCAGACTAACCCTGTGCAGCCTCTGTCAAATGGCACAAATATGAAAAACGAGTTTTCAAATTTCCCTGCTTTGGATGGGTCTGAAGTGAAAAGAGAGGAATGCCAAATGGGTGTGGGTTATACTTACAATCAGCACTTTCTTCCTCACAGTTTAAGTGGTTCTGAAAGTGCATCAAAGTTATTGCAGAGGAGCTTCAGTTGTAGCTCTTTTCATGGGAATCCTGGTTTTCCTCACTCTGACACTCTCATGGGCTCGCCAAAATTTCAATGGCATGCCTTGAGCTCCCCTGAAAACAATTTCTTCAATGGAGAAATGAGGAAGGTTTGCAGCACAGGAGATTTGCAGAACTTTAATACGTCACGAACGCAGAGCCCCTCATCGGAGAAAGCTAACTTCAAAGTAGGGCGTTACAGTGCCGAAGAAAGAAAAGAAAAAATCTCTAAATACAGAGCCAAGAGAAGCCACAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAATACGCGTACGTGGCAGATTCGCACGCAACGATGAAATCAGTCACATTTTGGAAGCTCCATGTTCAATCAGAGAAGAATTAGAAGACGAGTTCTGGATTGAACTCATCGATGAGTTAAATGGCGAACTCCTCATGTAG 888 0.4291 MSSDLYTFDIPIHRHSRPDTVSYDGSGDHMFFSDPYHSPFFNVSPIDVARDNLNNSHDPFSPFSPQITHLENQSLYQTNPVQPLSNGTNMKNEFSNFPALDGSEVKREECQMGVGYTYNQHFLPHSLSGSESASKLLQRSFSCSSFHGNPGFPHSDTLMGSPKFQWHALSSPENNFFNGEMRKVCSTGDLQNFNTSRTQSPSSEKANFKVGRYSAEERKEKISKYRAKRSHRKFNKIIKYACRKTLADNRIRVRGRFARNDEISHILEAPCSIREELEDEFWIELIDELNGELLM 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3729g00059 295 ProSiteProfiles CCT domain profile. 218 260 IPR010402 GO:0005515
Gabi3729g00059 295 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 82 268 IPR045281 GO:0009909
Gabi3729g00059 295 Pfam CCT motif 218 260 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3729g00059 Gabi-Chr3729 568189 569495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3729g00059 214 265 C2C2-CO-like Transcription Factor Family AT5G24930 42.373 9.15e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi3729g00059 CCT 1.4e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3729g00059 - - gmx:100786853 351.288