Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3729g00043 ATGAGAGAAATCCTCCACATTCAAGCGGGTCAATGCGGCAACCAAATTGGAGGCAAGTTTTGGGAGGTTATGTGTGATGAACATGGGATAGATGCCACTGGAAGCTATGTAGGAAATTCCCATCTTCAACTTGAGAGGGTTAACGTGTACTACAATGAAGCAAGTGGTGGACGCTATGTTCCTAGAGCGGTGCTGATGGACCTTGAACCAGGGACCATGGACAGCTTGCGTTCTGGTCCTTATGGGAAAATCTTTAGGCCTGATAACTTTGTGTTTGGGCAAAATGGAGCTGGAAACAACTGGGCTAAAGGGCATTACACTGAGGGTGCAGAGCTTATCGATTCTGTTCTTGATGTTGTTCGCAAAGAAGCTGAGAATTGTGATTGCTTGCAAGGTTTCCAAATTTGTCATTCACTGGGAGGTGGAACTGGATCTGGAATGGGAACCCTGCTAATCTCAAAGATCAGAGAGGAATATCCTGATAGGATGATGTTGACTTTCTCAGTGTTTCCATCCCCTAAGGTCTCAGACACTGTTGTTGAACCCTATAATGCCACCCTCTCTGTTCATCAACTCGTTGAGAATGCAGACGAATGCATGGTACTTGACAATGAGGCACTCTATGATATCTGTTTCCGAACCCTCAAGCTCACAAATCCAAGTTTTGGTGATCTCAACCATTTGATCTCAACAACAATGAGTGGAGTAACATGTTGCCTTCGTTTTCCTGGTCAACTCAACTCTGATCTTCGCAAGCTAGCGGTTAACCTTATCCCTTTCCCACGCCTACATTTCTTCATGGTGGGTTTTGCTCCCTTAACATCACGTGGCTCTCAACAATACCGAGCCCTCACCATTCCTGAGCTTACACAACAAATGTGGGATGCTAAAAACATGATGTGTGCCGCAGATCCAAGACATGGAAGGTACCTAACAGCCTCGGCCATGTTCCGTGGCAAAATGAGCACTAAGGAAGTGGATGAACAGATGATAAATGTGCAAAACAAAAACTCATCCTATTTTGTCGAATGGATACCACACAATGTAAAATCAAGTGTTTGTGATATCCCACCAACAGGGTTATCCATGTCCTCCACGTTCATGGGGAATTCTACTTCAATCCAAGAGATGTTTAGGCGTGTTTCGGAGCAATTCACGGTCATGTTTAAGAGAAAGGCTTTCCTGCATTGGTACACTGGAGAGGGTATGGATGAGATGGAGTTCACCGAGGCTGAGAGTAATATGAATGACTTGGTTGCTGAGTATCAACAGTATCAAGATGCATCAGCAGTGGAAGACGAGTTTGATGAAGAGGAAGAGGATGAATTCAAGGATCCTTTGGAGTATATTTACAGGATTAGACCTGAGGCTGAGCCTTATGGAATTTGTAGGATTGTACCTCCTAAGAGTTGGAAACCCCCTTTTGCTTTGGATCTGGACACTTTCACTTTCCCTACCAAAACGCAGGCAATTCACAAGCTGCAGGCACGTCCTGCTGCAACTGACTCCAAGACTTTTGAGTTGGACTACTCTAGGTTTTTACAGGATCATTCTAGTAAGAAGTCCAAGAAAAAAGTTGTGTTCGAGGGGGAGGAGTTGGACTTGTGCAAGCTGTTCAATGCCGTGAAGCGTTTTCGCGGTTATGATAAGGTTGTCGACGAGAAGAAATGGGGGGATGTTGCTCGGTTTGTGAGGTCGGCCGCCAAGATTTCGGACTGTGCTAAGCATGTGTTGTGTCAGTTGTACCGTGAGCATTTGTATGATTACGAGAATTACTATAATCGGATGAATCGGGGGAAAATTAGGAGTTGTAAGAAAGGGGTGCAAGAGGACCGCAAGAGTGATCACGGGGTACAATCTTCGGCGGTGTCCAAGAGGCATCAACGCGGTGTAGATTGTTTGAAAGTTAAGGATTGTAAAGTGCAGGAAGAAGAACATGATCAGATTTGTGAGCAATGCAAGAGTGGTTTGCATGGGGAACTCATGCTTTTGTGTGATAGGTGTGATAAGGGATGGCATATTTATTGTCTTTCCCCTCCACTGAAGCAAATTCCTCCGGGAAATTGGTATTGTTTAAACTGCTTGAATTCGGATAGGGACAGCTTTGGTTTTGTGCCTGGGAAGCATTATTCGTTGGAAGCTTTTAGACGCATTGCAGACCGGTCAAGGAAGAGATGGTTTGGACCAGGAACTGTTTCAAGGGTGCAAATAGAGAAAAGGTTTTGGGAGATTGTAGAGGGATCAGTTGGTGAGGTTGAGGTTATGTATGGAAATGACTTGGATACATCAGTCTGTGGGAGTGGCTTCCCGCGTGTAACTGATCAGAAACCACAATCTATCGATGAAAAGTTATGGCAAGAATACTTAACTAACCCATGGAATCTTAATAACTTGCCTAAGTTGAAAGGATCAATGCTTCGAGCAGTTCATCAAAATATCACTGGTGTTATGGTACCCTGGCTATATATTGGGATGCTATTCTCATCCTTTTGCTGGCATTTTGAGGACCACTGCTTTTACTCGATAAATTATCTACACTGGGGAGAGCCAAAGTGCTGGTACAGTGTTCCTGGTAGTCAAGCCAGTGCTTTTGAGAAGGTGATGAGAAGCAGTCTTCCTGATCTTTTTGATACGCAGCCTGATCTGCTTTTTCAGCTTGTTACTATGTTAAACCCATCTGTCTTGCAAGAAAATGGAGTTCCTGTCTACAGTATACTTCAGGAGCCTGGGAATTTTGTTATTACCTTCCCCAGATCTTATCATGGAGGTTTCAATCTTGGTTTAAATTGTGCGGAGGCAGTCAATTTTGCTCCTGCTGACTGGCTACCATATGGTGCATTTGGAGCAGATCTCTATCAGCGGTATCACAAAACTGCTGTCTTATCTCATGAGGAGCTTCTTTGTGTAGTAGCTCAGTATGGTGATGTTGATAGCAGAGTGTCTTCTTATTTGAAGAAGGAATTGTTGAGAATATCGGATAAAGAAAAATCTTGTAGAGAGAAACTTTGGAAAAATGGTATAATTAAATCTTCTCGTTTGGCTCCTCGAAAATGTCCTCAATATGTGGGAACTGAAGAGGATCCAGCATGCATTATTTGCCAGCAATATCTCTATCTTTCTGCTGTTGGGTGCCGTTGCAGGCCATCATCTTTTGTGTGTCTGGAGCACTGGGAACACCTTTGTGAGTGCAAAACCGTAAAACTTCGTCTTCTCTATCGTCATTCACTTGCAGAATTGTATGACTTGGCATTTTCTATGGACAAATATACTTCTGAGGATAAAGCTGAGTGTAGAAGTGTACGAAGGCAGTCTTCATGTCTGAGTGCTTTGACCAAAAAGGTGAAAGGTGGCTCCATTACTTTCGCTCAACTTGCTACAGAGTGGCTTCTGCAATCTAATACTATTCTTAAGAATGTTTTTCTGAGGGATGCGTTTGTTACTGCACTAAGGAAAGCTGAACAATTTCTTTGGGCTGGTTCTGAGATGGATTCTGTTCGGGATATGGCAAAGAATTTGATTGAAGCTCAGAAGTGGGCAGAAGGGATAAGAGATTGTGTAACTAAAATTGAGTTATGGTTGTGTCATCAGGACTCAAGTGTAAAAAAAGTTCATTTAGAATTTGTCAATGAGTTACTGAGATTTAATCCTGCACCATGCAATGAGCCTCGTTATCATAAATTGAAGGAATATGCCGAAGAAGCAAGGTTGTTAAATCAGGAGATTGATACTGCTTTATCTGTGTGTTCAACGATGTCTGAGTTGGAACTTTTATACTCCAAAGCTTGTGGCTTACCCATCCACATGAAAGAGAGTAAGAAATTAGAAGGGAAAATTTCTTCAACTAAGGCATGGCTGGATAATGTTAGAAAGTGCATCTCAGTGAGACATCCTACTGCATCAGAGGTTGATGTTCTTTACAAGTTAAAATTGGAGATTGTGGATCTTCAAGTTCAACTCCCAGAGATAGATGTGCTTCAGAATCTATTAAGTCAAGCTGAATCTTGTAGTACTCAATGTCGTGAAATGTTAGAAGGTCCTATGAATCTCAAGAATGTTGGTTCGCTGCTTAAGGAATGGGACTATTTTACAGTTGATGTACCAGAGTTGAAGCTTCTAAGGCAATATCATTCGGATGCTGTTTCATGGGTTTCCCACTTTAATGATGTTTTAGGTAGAGTTCATGCGCAGGAAGAACAACATAATGCAGTTGATGATTTGAAGATCATTTTTGAAAAAGGTTTATCTTTGAAAATTCAAGTTGATGAGTTGCCATTAGTTGAGATTGAGCTGAAGAAGGCTAATTGCCGGGAAAAGGCTTTGAAGGCACATGATACTAAGATGCCTCTCGAATTCATTCAGCAACTGTTGAGTGAGGCCACTATGCTACAAATTGAGGGAGAGAAACAATTCATCAAATTATCTTATGTGCTTGCTATTGCCATGCCTTGGGAGGAAAGGGCTAGAGAGATTCTTTCACATGAGGCTCCAATTTCTGACTTTGAGGACATGATCAGAGCTTCGGAAAACATATTTGTTATTCTTCCTTCACTTAATGATGTCAAGGATGCATTATTGGAAGCTAATTCCTGGTTAAGGAATTCAAAGCCATATTTAGTCTCTTCTACTTGTGCTTCAAATTCTCTGCGGAAAGTTGAGGATTTGCAGATGTTGGTTTCTCAATCAAAGCATCTTAAAATATCTTTGGAAGAAAGAAGGATGCTTGAATTAGTTTTGAAGAACTGCAAAATATGGGAGCATGAAGCATGTTCTGAACTAGATGATGCTAGGTGCCTCTTTGAATTGGATAACACTGGCCATGGAATAAGCAGCGGTTTAATGTTTAAACTGGAAGATTTGATTGCAAGGATCCAATCTGCCATAACATCTGGTGTATCACTTGGTTTTGACTTCAACGAGATTTCAAAACTTCAAGCATCTTGTTATACACTGCAATGGTGCCAAAGAGCCTTATCTTTCTGCAATCATTATCCTTCTTTAGAGGATGTTTTGGAGGTTGCAGAAGGTCTTTCTCATTCCTTTGCTTCTGGTGCTCTGGTGAAAGTATTAGTTGATGGAGTTGGATGGCTTAGGAGAGCATTAGATGGGATTTCTGGACCTCGCAGTTCTAGAAGATACGAGTTGACTTATGTTCAAGATATTCTTGCTGATTATCAGACTATTAATATGACCTTTGCAGCAGTATATCGTCAACTTGAAGAAGCCATTGGAAAACATGAGTTGTGGCAAGAGCAAGTACATGAGTTTTTTGGAAGTTCTGAGAAACAATCTTGGTCATCAACATTGCAGCTCAAGGAGCTTGGAGATACCATTGCCTTTAGTTGCCCAGAACTGGATTTAATTTCATCTGAAATTAAGAAGGTGGAAAATTGGAAGAAAAGATGCATGGATAACATAGGAACTTTAGTTCAAAATGAGAAATCGCTGCTTCATGCGCTGGAGAAGATAAAACAAACTGTAGATAGATCGTTCTTCATATATGGCAAGTTGCAAGATTGGAAGGAACAAAACATATGCATCTGCTGCTTTATTGATTCTGAAGATCAGGAATTTGTTACTTGTTCCACTTGTATGGAGTGCTATCATTTGCGGTGCATTGGACTAACAGCAAAAGATACATGCCTAGAAAACTATAAGTGCCCTTATTGTGAAATTTTGAAAAGTGAATCCCATTATCGGAATGGAGGTGCCCTTCTGAGGTTGGGGAAGAATCACGTTGAATTGAAAGTTCTCATCGAACTTCAGTCTGATGCTGAACATTTCTGTTCATGGTGCTGGATTGATGAAAGAGATGTTTTGAACCAACTTGTAGAGAAAGCTCTGGCATGCAAATCTTGCTTGAGAGAAATAGTGAACCTTGCATCAGCTAATGTTGGCGAAGATATTAGCATCATATCTGAAAAATTGATCATTGCTATCAAGGCTAGCAAAGTGGCTGGTGTCTATGATCGATATGATAATTGTGACCTCGAGCTTGCTTTAGCAAAAAACTTGTGGAAAATTCAAGTCAATAGATTGTTAAATGGTGTACGAAAGCCCACTATCCAACAGATTCAGAAGCATCTGAAAGAGGGACCAGCTATGGAAATATCTCCTGAAGATCACCATATGTTGAAACTTACAAATGTGAATTGCTTGTGTCTGCAGTGGGTAGAACTAGCCAAAAAGGTAGCAATTGATTCTGGGGCACTCAGCCTAAACAAAGTTTTTGAACTTGTAGTGGAAGGTGAAAACTTGTCAGTTGATGTGAATGAGGAACTCAAGATATTAAGAGCTCGATGCATGCTTTATTGCATTTGTCGAAAGCCGTTTGATCCAAGGAGGATGATTGCATGTTATCATTGTAATGAGTGGTATCACTTCGATTGCATGAAATTACCAAGCGCACGAGAGGTCTACATTTGTCCTGCATGTAACCCGCATACAGTAGAATTGCCTACAAATCATGACAGATTAAGTAATAGTAAATTTGAGGAGCCTAAAACCCCATCTCCCAGGCATACAAACCCTAGAAAGAAACAGAAGAGAGATGTGCCTAGTCTCACTTGCAAGATGTTTGCAACCAGGAATCAAGATAATGGTAATTTTAGGTGTTCGAGTGGGATAGAATGTCTAAGGTGGCAAAATCGAAAGCCTTTCAGAAGAGCAGCTAAGAAACGTGTTGAGCTTCGAAGTCTTTCTCCATTTCTATGCAGACAACAATAA 6723 0.4132 MREILHIQAGQCGNQIGGKFWEVMCDEHGIDATGSYVGNSHLQLERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTIPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDASAVEDEFDEEEEDEFKDPLEYIYRIRPEAEPYGICRIVPPKSWKPPFALDLDTFTFPTKTQAIHKLQARPAATDSKTFELDYSRFLQDHSSKKSKKKVVFEGEELDLCKLFNAVKRFRGYDKVVDEKKWGDVARFVRSAAKISDCAKHVLCQLYREHLYDYENYYNRMNRGKIRSCKKGVQEDRKSDHGVQSSAVSKRHQRGVDCLKVKDCKVQEEEHDQICEQCKSGLHGELMLLCDRCDKGWHIYCLSPPLKQIPPGNWYCLNCLNSDRDSFGFVPGKHYSLEAFRRIADRSRKRWFGPGTVSRVQIEKRFWEIVEGSVGEVEVMYGNDLDTSVCGSGFPRVTDQKPQSIDEKLWQEYLTNPWNLNNLPKLKGSMLRAVHQNITGVMVPWLYIGMLFSSFCWHFEDHCFYSINYLHWGEPKCWYSVPGSQASAFEKVMRSSLPDLFDTQPDLLFQLVTMLNPSVLQENGVPVYSILQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPYGAFGADLYQRYHKTAVLSHEELLCVVAQYGDVDSRVSSYLKKELLRISDKEKSCREKLWKNGIIKSSRLAPRKCPQYVGTEEDPACIICQQYLYLSAVGCRCRPSSFVCLEHWEHLCECKTVKLRLLYRHSLAELYDLAFSMDKYTSEDKAECRSVRRQSSCLSALTKKVKGGSITFAQLATEWLLQSNTILKNVFLRDAFVTALRKAEQFLWAGSEMDSVRDMAKNLIEAQKWAEGIRDCVTKIELWLCHQDSSVKKVHLEFVNELLRFNPAPCNEPRYHKLKEYAEEARLLNQEIDTALSVCSTMSELELLYSKACGLPIHMKESKKLEGKISSTKAWLDNVRKCISVRHPTASEVDVLYKLKLEIVDLQVQLPEIDVLQNLLSQAESCSTQCREMLEGPMNLKNVGSLLKEWDYFTVDVPELKLLRQYHSDAVSWVSHFNDVLGRVHAQEEQHNAVDDLKIIFEKGLSLKIQVDELPLVEIELKKANCREKALKAHDTKMPLEFIQQLLSEATMLQIEGEKQFIKLSYVLAIAMPWEERAREILSHEAPISDFEDMIRASENIFVILPSLNDVKDALLEANSWLRNSKPYLVSSTCASNSLRKVEDLQMLVSQSKHLKISLEERRMLELVLKNCKIWEHEACSELDDARCLFELDNTGHGISSGLMFKLEDLIARIQSAITSGVSLGFDFNEISKLQASCYTLQWCQRALSFCNHYPSLEDVLEVAEGLSHSFASGALVKVLVDGVGWLRRALDGISGPRSSRRYELTYVQDILADYQTINMTFAAVYRQLEEAIGKHELWQEQVHEFFGSSEKQSWSSTLQLKELGDTIAFSCPELDLISSEIKKVENWKKRCMDNIGTLVQNEKSLLHALEKIKQTVDRSFFIYGKLQDWKEQNICICCFIDSEDQEFVTCSTCMECYHLRCIGLTAKDTCLENYKCPYCEILKSESHYRNGGALLRLGKNHVELKVLIELQSDAEHFCSWCWIDERDVLNQLVEKALACKSCLREIVNLASANVGEDISIISEKLIIAIKASKVAGVYDRYDNCDLELALAKNLWKIQVNRLLNGVRKPTIQQIQKHLKEGPAMEISPEDHHMLKLTNVNCLCLQWVELAKKVAIDSGALSLNKVFELVVEGENLSVDVNEELKILRARCMLYCICRKPFDPRRMIACYHCNEWYHFDCMKLPSAREVYICPACNPHTVELPTNHDRLSNSKFEEPKTPSPRHTNPRKKQKRDVPSLTCKMFATRNQDNGNFRCSSGIECLRWQNRKPFRRAAKKRVELRSLSPFLCRQQ 2240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3729g00043 2240 Coils Coil 1227 1247 - -
Gabi3729g00043 2240 SMART Tubulin_4 47 244 IPR003008 GO:0005525
Gabi3729g00043 2240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2088 2146 IPR013083 -
Gabi3729g00043 2240 ProSiteProfiles JmjN domain profile. 433 474 IPR003349 -
Gabi3729g00043 2240 SMART JmjN_1 440 473 IPR003349 -
Gabi3729g00043 2240 Pfam C5HC2 zinc finger 1030 1081 IPR004198 -
Gabi3729g00043 2240 Pfam ARID/BRIGHT DNA binding domain 504 590 IPR001606 GO:0003677
Gabi3729g00043 2240 CDD beta_tubulin 2 426 - -
Gabi3729g00043 2240 SMART cupin_9 787 953 IPR003347 -
Gabi3729g00043 2240 Gene3D Cupin 687 985 - -
Gabi3729g00043 2240 Pfam PHD-finger 649 696 IPR019787 -
Gabi3729g00043 2240 ProSiteProfiles Zinc finger PHD-type profile. 647 697 IPR019787 -
Gabi3729g00043 2240 PANTHER TUBULIN 3 426 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 Gene3D Tubulin/FtsZ, GTPase domain 1 262 IPR036525 -
Gabi3729g00043 2240 FunFam Tubulin beta chain 264 373 - -
Gabi3729g00043 2240 CDD ARID 502 590 - -
Gabi3729g00043 2240 SUPERFAMILY FYVE/PHD zinc finger 1826 1891 IPR011011 -
Gabi3729g00043 2240 SMART PHD_3 649 695 IPR001965 -
Gabi3729g00043 2240 SMART PHD_3 2103 2145 IPR001965 -
Gabi3729g00043 2240 SMART PHD_3 1844 1890 IPR001965 -
Gabi3729g00043 2240 SUPERFAMILY Clavaminate synthase-like 778 968 - -
Gabi3729g00043 2240 FunFam Predicted protein 755 958 - -
Gabi3729g00043 2240 SUPERFAMILY FYVE/PHD zinc finger 2098 2149 IPR011011 -
Gabi3729g00043 2240 SMART ARID_2 497 590 - -
Gabi3729g00043 2240 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 140 146 IPR017975 GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 51 70 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 132 150 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 176 189 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 370 398 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 190 210 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 93 104 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 106 130 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Tubulin signature 151 172 IPR000217 GO:0005874|GO:0007017
Gabi3729g00043 2240 Gene3D - 263 373 IPR037103 -
Gabi3729g00043 2240 ProSitePatterns Tubulin-beta mRNA autoregulation signal. 1 4 IPR013838 -
Gabi3729g00043 2240 FunFam Tubulin beta chain 374 436 - -
Gabi3729g00043 2240 ProSitePatterns Zinc finger PHD-type signature. 2104 2144 IPR019786 -
Gabi3729g00043 2240 Pfam jmjN domain 440 467 IPR003349 -
Gabi3729g00043 2240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 641 686 IPR013083 -
Gabi3729g00043 2240 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 243 IPR036525 -
Gabi3729g00043 2240 SMART Tubulin_C_4 246 383 IPR018316 -
Gabi3729g00043 2240 Pfam Tubulin/FtsZ family, GTPase domain 3 211 IPR003008 GO:0005525
Gabi3729g00043 2240 ProSiteProfiles ARID domain profile. 500 594 IPR001606 GO:0003677
Gabi3729g00043 2240 Gene3D Cupin 427 543 - -
Gabi3729g00043 2240 SUPERFAMILY Tubulin C-terminal domain-like 244 428 IPR008280 -
Gabi3729g00043 2240 Coils Coil 408 428 - -
Gabi3729g00043 2240 Pfam PLU-1-like protein 1545 1800 IPR013637 -
Gabi3729g00043 2240 Pfam PLU-1-like protein 1395 1584 IPR013637 -
Gabi3729g00043 2240 Pfam PLU-1-like protein 1298 1418 IPR013637 -
Gabi3729g00043 2240 Pfam Tubulin C-terminal domain 261 382 IPR018316 -
Gabi3729g00043 2240 ProSitePatterns Zinc finger PHD-type signature. 650 694 IPR019786 -
Gabi3729g00043 2240 SMART bright_3 501 595 IPR001606 GO:0003677
Gabi3729g00043 2240 SUPERFAMILY FYVE/PHD zinc finger 643 697 IPR011011 -
Gabi3729g00043 2240 ProSiteProfiles JmjC domain profile. 787 953 IPR003347 -
Gabi3729g00043 2240 MobiDBLite consensus disorder prediction 2155 2184 - -
Gabi3729g00043 2240 FunFam Tubulin beta chain 1 262 - -
Gabi3729g00043 2240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1834 1903 IPR013083 -
Gabi3729g00043 2240 Pfam JmjC domain, hydroxylase 820 936 IPR003347 -
Gabi3729g00043 2240 CDD PHD_RSF1 650 694 - -
Gabi3729g00043 2240 Gene3D Helix hairpin bin 374 426 IPR023123 -
Gabi3729g00043 2240 MobiDBLite consensus disorder prediction 2157 2172 - -
Gabi3729g00043 2240 SUPERFAMILY ARID-like 483 601 IPR036431 GO:0003677
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 88 99 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 108 126 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 152 164 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 212 224 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 265 281 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 329 343 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 245 258 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 377 388 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 311 329 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 230 239 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 41 58 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 412 430 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Gabi3729g00043 2240 PRINTS Beta-tubulin signature 347 370 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3729g00043 Gabi-Chr3729 433021 466533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3729g00043 700 1079 JUMONJI Transcription Factor Family AT1G08620 41.727 5.04e-92 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gabi3729g00043 PLU-1 7.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3729g00043 K11446 - gmx:100789512 3108.93