Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3729g00015 ATGGGTAAAGCATCAAAATGGTTTCGCGGACTTCTCGGTCTTAGAAAACCAGACGCGTCGTCTTCCCCCGCAAAGCCACCCAAAGAGAAACGCCGATGGAGCTTCGTCAAGTCTTACAGAGAAAAGGACAACAACCGTAATCATCATGCCACCGTGGACCACCACGCAACATCCACCTACGAGGACTTACCGGTTCACTCCTCGGGACACGTGGAAGGCGCCGTTCCTGACAACCACACCATGGCTATGGCAGCCGCCACCGCTGCCGTGGCAGAGGCGGCCGTCGCTGCTGCTCATGCGGCCGCCGCCGTTGCCAGACTCGCTAGCAGTGGCAGGACCACCGCTGGAGGCATTATTCGCGAGGAGTGGGCAGCCACTAAAATTCAAGCCGCGTTTCGAGGCTGTTTGGCAAGGAGAGCGCTGCGAGCGTTAAAAGGATTGGTGAAGCTTCAGGCATTGGTGAGAGGTCACATTGAGAGGAAGCGCACAGCAGAGTGGCTGCAAAGAATGCAAGCACTTTTACGTGCACAGGCCCGAGTCCGTGCTGGTCGGGCCCAAATTCTGCAGACCCCGTATTGGAATGCAAAATCATCCACTGTTCACCTCCATGGTCCAGCAACACCAGACAAATTTGAAAGCCCAATCAGATCCGAGAGCATGAAATATGATCAGTCATCATCAGTACTCAAGAGAAATGGCTCCAAATCCCGTGTCCAGATCAATGGTAATCACGAGAAATGTGTGAATAGATCAGATAGTCGGGTAGATGAACAACCATTAAATCAACGAAGATCATGGATAAGAACTTGTAGCATGGATGATGATAGAAGTTTCAGGGTTCTTGAAATGGATTCTGGAAAACCACACATCACATCAAAACGTAGAAACCTCTTTTACTCCTATAGCCAAGCTTTGGTTTCGGATCATCAGAGTCAGAGTTGGACCACAACAAAGGACTCAACATCTAATCAATCGGGTCAAAGTCTATCTCCTTGTGAAGTTCGGTCTTGCAGCCCTCTAAAAATCAACGAGGATGAGGTGAGCTCATTCTACGGTGCTGATAATAGTCCTCAAATTCCATCTGCGTCTTCTAAAGATGGTGGCTCCAAAAGAAGTCCATTTACTTCTACAAGGAGCGATGGCTCAAGAAGCTATCTAAGTGGTTACTCTGACTATCCAAGTTACATGGCTTACACTGAGTCTTCAAAAGCAAAAGTAAGATCTCTCAGTGCACCAAAACAAAGGCCTCAGTATGAGAGGTCTAGTTCATCTAACAGGTACTCGCTTCATGGATTTGGTGAGTCAAGATTGGCTACACAAAGGGTATCTACATTGCACGCAAATTTCACTAGCAAAGCCTATCCTGGTTCTGGTCGTTTGGACAAACTTGGTTTGCCTGTGGGTTATAGATATTGA 1416 0.4831 MGKASKWFRGLLGLRKPDASSSPAKPPKEKRRWSFVKSYREKDNNRNHHATVDHHATSTYEDLPVHSSGHVEGAVPDNHTMAMAAATAAVAEAAVAAAHAAAAVARLASSGRTTAGGIIREEWAATKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAEWLQRMQALLRAQARVRAGRAQILQTPYWNAKSSTVHLHGPATPDKFESPIRSESMKYDQSSSVLKRNGSKSRVQINGNHEKCVNRSDSRVDEQPLNQRRSWIRTCSMDDDRSFRVLEMDSGKPHITSKRRNLFYSYSQALVSDHQSQSWTTTKDSTSNQSGQSLSPCEVRSCSPLKINEDEVSSFYGADNSPQIPSASSKDGGSKRSPFTSTRSDGSRSYLSGYSDYPSYMAYTESSKAKVRSLSAPKQRPQYERSSSSNRYSLHGFGESRLATQRVSTLHANFTSKAYPGSGRLDKLGLPVGYRY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3729g00015 471 MobiDBLite consensus disorder prediction 350 383 - -
Gabi3729g00015 471 PANTHER IQ-DOMAIN 5-RELATED 1 430 - -
Gabi3729g00015 471 MobiDBLite consensus disorder prediction 404 426 - -
Gabi3729g00015 471 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Gabi3729g00015 471 MobiDBLite consensus disorder prediction 310 334 - -
Gabi3729g00015 471 MobiDBLite consensus disorder prediction 1 32 - -
Gabi3729g00015 471 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Gabi3729g00015 471 Pfam IQ calmodulin-binding motif 123 142 IPR000048 GO:0005515
Gabi3729g00015 471 Gene3D - 122 163 - -
Gabi3729g00015 471 MobiDBLite consensus disorder prediction 310 335 - -
Gabi3729g00015 471 Pfam Protein of unknown function (DUF4005) 356 429 IPR025064 -
Gabi3729g00015 471 SMART iq_5 143 164 IPR000048 GO:0005515
Gabi3729g00015 471 SMART iq_5 120 142 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3729g00015 Gabi-Chr3729 198527 202025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3729g00015 1 471 IQD Protein Family AT4G23060 42.135 1.27e-72 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3729g00015 - - qsa:O6P43_024223 484.567