Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3729g00012 ATGTGGGCTTTATGTCTTGGAGCATTGATTATTATAGGTATTACACATTGGGTTTATAGATGGAGAAATCCTAGTTGTAATGGAAAACTCCCACCAGGTTCAATGGGTTTGCCTCTTCTGGGTGAGAGCCTTCAGTTCTTTTCCCCTAACACTTCTTCTGATATTCCTCCCTTCATCAGGCAGAGAATGAAAAGGTATGGACCAATCTTCAAGACCAACTTGGTTGGACGACCAGTTGTAGTATCAACGGACCCGGATCTTAATTACTTCATCTTTCAACAGGAGGGACAAGTGTTCCAGAGCTGGTATCCAGATACATTCACAGAGATCTTTGGAAGACAAAATGTAGGTTCCTTACATGGGTTTATGTACAAGTACCTTAAGAACATGGTGCTGAATCTGTTTGGTCCTGAAAGCCTTAAAAAGATGCTCTCTGAAGTTGAACAGACAGTGTGCAGAACATTACAGCAGTGGTCGTATCAGGACAGTGTCGAATTCAAGGAAGGAACAGCAAGGATGATATTTGATTTAACTGCGAAAAAACTTATCACTTATGATTCGTCCAAGACCTTGGAGAATCTAAAGGACAACTTTGATGCATTTATACAAGGACTCATCTCGTTCCCTCTGGATGTTCCAGGAACTGCTTATCACAAATGTCTACAGGGTAGGAAAAGGGCAATGAAAATGCTGAAGAACATGTTGCACGAAAGACGGGAAATGCATAGGAAACAGCAGACAGATTTCTTTGACTTTGTTATTGAAGAACTGAAGAAAGAGGGAACAATCCTAACTGAAGCAATAGCTCTGGACCTCATGTTTGTGCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTGGCTCTGACTTATGCCATGAAATTACTCACTGACCATCCCTTGGTGCTCAAGCAATTACAAGAAGAACATGAAGCCATCCTCGAACGACGTGAAGATCCTAACTCCGGAGTCACGTGGAAAGAATACAAATCAATGACATTTACATTTCAGTTCATAAATGAAACCGTGAGACTAGCAAATATAGTTCCAGGAATCTTCCGGAAGACATTAAGAGAAATTACTTTTAAGGGATATACCATACCAGCAGGATGGGCGGTCATGGTGTGTCCGCCAGCTGTACACTTGAACCCGGCGAAATATCAGGATCCTCTTGTCTTCAACCCATGGAGATGGGAGGGAGTGGAGCTAAATGGTGCCAGCAAAAATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGAACAGACTTCACTAAGGTTCAGATGGCTGTTTTTCTTCATAGCTTGGTAACAAAGTACAGGTGGCGACCCATCAAAGGAGGGAATATTGTACGAACTCCTGGTTTGCAATTTCCAAATGGCTTTCACGTTCAGATCATGGAGAAAGATCAATTAAGGAAGCAGGAACCAGAATATACCATTACAAACTAG 1452 0.4215 MWALCLGALIIIGITHWVYRWRNPSCNGKLPPGSMGLPLLGESLQFFSPNTSSDIPPFIRQRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGQVFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLNLFGPESLKKMLSEVEQTVCRTLQQWSYQDSVEFKEGTARMIFDLTAKKLITYDSSKTLENLKDNFDAFIQGLISFPLDVPGTAYHKCLQGRKRAMKMLKNMLHERREMHRKQQTDFFDFVIEELKKEGTILTEAIALDLMFVLLFASFETTSLALTYAMKLLTDHPLVLKQLQEEHEAILERREDPNSGVTWKEYKSMTFTFQFINETVRLANIVPGIFRKTLREITFKGYTIPAGWAVMVCPPAVHLNPAKYQDPLVFNPWRWEGVELNGASKNFMAFGGGMRFCVGTDFTKVQMAVFLHSLVTKYRWRPIKGGNIVRTPGLQFPNGFHVQIMEKDQLRKQEPEYTITN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3729g00012 483 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 CDD CYP90-like 62 466 - -
Gabi3729g00012 483 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 Pfam Cytochrome P450 31 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 FunFam Cytochrome P450 family protein 22 468 - -
Gabi3729g00012 483 SUPERFAMILY Cytochrome P450 28 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Gabi3729g00012 483 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00012 483 PANTHER CYTOCHROME P450 26 29 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3729g00012 Gabi-Chr3729 149930 152967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3729g00012 1 469 Cytochrome P450 AT1G12740 74.790 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3729g00012 - - gmx:100812089 891.723