Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3729g00011 ATGTGGGCTTTATGTCTTGGAGCATTGATTATTATAGGTATTACACATTGGGTTTATAGATGGAGAAATCCTAGTTGTAATGGAAAACTCCCACCAGGTTCAATGGGTTTGCCTCTTCTGGGTGAGAGCCTTCAGTTCTTTTCCCCTAACACTTCTTCTGATATTCCTCCCTTCATCAGGCAGAGAATGAAAAGGTATGGACCAATCTTCAAGACCAACTTGGTTGGACGACCAGTTGTAGTATCAACGGACCCGGATCTTAATTACTTCATCTTTCAACAGGAGGGACAAGTGTTCCAGAGCTGGTATCCAGATACATTCACAGAGATCTTTGGAAGACAAAATGTAGGTTCCTTACATGGGTTTATGTACAAGTACCTTAAGAACATGGTGCTGAATCTGTTTGGTCCTGAAAGCCTTAAAAAGATGCTCTCTGAAGTTGAACAGACAGTGTGCAGAACATTACAGCAGTGGTCGTATCAGGACAGTGTCGAATTCAAGGAAGGAACAGCAAGGATGATATTTGATTTAACTGCGAAAAAACTTATCACTTATGATTCGTCCAAGACCTTGGAGAATCTAAAGGACAACTTTGATGCATTTATACAAGGACTCATCTCGTTCCCTCTGGATGTTCCAGGAACTGCTTATCACAAATGTCTACAGGGTAGGAAAAGGGCAATGAAAATGCTGAAGAACATGTTGCACGAAAGACGGGAAATGCATAGGAAACAGCAGACAGATTTCTTTGACTTTGTTATTGAAGAACTGAAGAAAGAGGGAACAATCCTAACTGAAGCAATAGCTCTGGACCTCATGTTTGTGCTCCTCTTTGCAAGCTTTGAAACCACTTCTCTGGCTCTGACTTATGCCATGAAATTACTCACTGACCATCCCTTGGTGCTCAAGCAATTACAAGAAGAACATGAAGCCATCCTCGAACGACGTGAAGATCCTAACTCCGGAGTCACGTGGAAAGAATACAAATCAATGACATTTACATTTCAGTTCATAAATGAAACCGTGAGACTAGCAAATATAGTTCCAGGAATCTTCCGGAAGACATTAAGAGAAATTACTTTTAAGGTTTTTGTTTTTGATGCAGGATATACCATACCAGCAGGATGGGCGGTCATGGTGTGTCCGCCAGCTGTACACTTGAACCCGGCGAAATATCAGGATCCTCTTGTCTTCAACCCATGGAGATGGGAGGGAGTGGAGCTAAATGGTGCCAGCAAAAATTTCATGGCTTTCGGTGGAGGCATGAGATTTTGTGTTGGAACAGACTTCACTAAGGTTCAGATGGCTGTTTTTCTTCATAGCTTGGTAACAAAGTACAGGTGGCGACCCATCAAAGGAGGGAATATTGTACGAACTCCTGGTTTGCAATTTCCAAATGGCTTTCACGTTCAGATCATGGAGAAAGATCAATTAAGGAAGCAGGAACCAGAATATACCATTACAAACTAG 1470 0.4197 MWALCLGALIIIGITHWVYRWRNPSCNGKLPPGSMGLPLLGESLQFFSPNTSSDIPPFIRQRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGQVFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLNLFGPESLKKMLSEVEQTVCRTLQQWSYQDSVEFKEGTARMIFDLTAKKLITYDSSKTLENLKDNFDAFIQGLISFPLDVPGTAYHKCLQGRKRAMKMLKNMLHERREMHRKQQTDFFDFVIEELKKEGTILTEAIALDLMFVLLFASFETTSLALTYAMKLLTDHPLVLKQLQEEHEAILERREDPNSGVTWKEYKSMTFTFQFINETVRLANIVPGIFRKTLREITFKVFVFDAGYTIPAGWAVMVCPPAVHLNPAKYQDPLVFNPWRWEGVELNGASKNFMAFGGGMRFCVGTDFTKVQMAVFLHSLVTKYRWRPIKGGNIVRTPGLQFPNGFHVQIMEKDQLRKQEPEYTITN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3729g00011 489 CDD CYP90-like 62 472 - -
Gabi3729g00011 489 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PANTHER CYTOCHROME P450 26 29 449 - -
Gabi3729g00011 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Gabi3729g00011 489 Gene3D Cytochrome P450 22 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 SUPERFAMILY Cytochrome P450 28 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 Pfam Cytochrome P450 31 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3729g00011 489 FunFam Cytochrome P450 family protein 22 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3729g00011 Gabi-Chr3729 149930 152967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3729g00011 1 475 Cytochrome P450 AT1G12740 75.420 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3729g00011 - - gmx:100812089 885.174