Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3729g00008 ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCACCAAGGCATAGATTGAGGAGTGAAGCATCTGCACAATTTCAAGCTTGCCATTTCCAACAACCTTCGATGAGCACGCAGAGATTGGACTTGCCTTGTAGCTTCCCGCGGAAAGATAGCTCTCGTTCGCAGCAACTTAGGCCGGTGGGCCTTTCAGTGGAGAAGCCGATTGAAGCCAAGACCGGTTCTTATTCTCTGAAGCAGAACATAAGACTTCCACCTTTGGCAACCACATCACAGGCGGCCACAAGCACTCACCAGATCAACGATGAGTTTTGGGACAAAAGCGCTAAGAGTCTGAAGAGGCTTGCAGAGCACGAGTCTTCTCCCAAGAAAGCCAAGAGAAAAAAGGGTAGCAGCGATGATGTTCTGGAAGGAGGAGGAGGAGGAGGGGAGGGTTTGAGTTTGGCTCAAATGGGTGCTGGAAATTTTTGGTTACAGCCTGGCCTTGACATGACTACAAGGACTTCACTTCCTTTCTCTCTGACTTGTTCAGGGGATGAGGAAAGGGTCTGTTTTGTTCCTAGTGAAGTGGTTTCTGCTCCTGCTCCTTGGGTGGAATCTTCTATAACTAAGATCACGGACCTTGGTGAGAAGAACGCTGAGGGTAGCCACCACCTTCCTCCTGTAAAGGAAGCCTCACCCTCCGATTCTTCATCAGAAAGCCAAGGCTTGAGCCTGAGGTTGAATGAGAATGTCTCGGAGCATGAAGTGGGTAATGGGTCAGGGATTCCTCCGCATCACTATCAAGGCACTGAGGTGGAGACAGGAGAGGAGGATAGCCAAGAGGAGAATCGTGGATTTGAACTTGTTAGTTTACTCACTGCTTGCGTTGAGGCTATTGGATCGAAGAATGTGGCTACAATCAACCATTTCATAGCAACATTGGGTGATCTTGCGTCTCCAAAGGGAACCTCAATAAGCCGTTTGTGTGCTTATTTTACCGAAGCCTTAGCCATCAGGGTTACCAGGCTCTGGCCTCATATATTTCATATTACCACTCCTCGGGAGCTAGATAGGGTGGTGGTGGAGGATGAAACTGGCACTGCATTAAGGCTTCTGAATCAGGTCAGTCCAATCCCCAAGTTCCTTCATTTCACTTCAAATGAAATATTGTTGAGAGCTTTTGAAGGGAAAGACAGGGTTCACATCATAGATTTTGACATAAAGCAAGGGCTTCAATGGCCGAGCTTGTTCCAGAGTTTAGCTTCGAGGACTAATCCTCCAAGCCATGTTAGAATCACGGGCATTGGGGAGTCCAAGCAAGAGCTGAATGAAACCGGTGATAGGCTTGCTGGATTTGCTGAGGCATTGAACCTTCCCTTCGAGTTTCATCCAGTGGTGGATAGACTAGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACACGAAAGTGTGGCTGTGAATTGTGTTCTGCAGCTACACAAGACGCTTTATGATGGGAGCGGAGGAGCTTTGAGGGATTTTTTGGGGCTCATTCGCAGCACAAATCCTACAATGGTGGTTATGGCAGAGCAAGAAGCACAGCACAATGAGGTCAGGTTGGAAACAAGAGTGTGCAATGCTTTGAAATATTACTCTGCTCTGTTTGATTCCATCGATCACTGCCTTCCAAGAGAGAGCCCCATGAGGACTAAGATAGAGGAGATGTATGCTCGAGAGATCAGGAACATCATTGCTTGTGAAGGAAGCGACAGGTTGGAGAGGCATGAGAGTTTCGTGAATTGGAGGAAGATGATGGAGCAAGGAGGGTTCAGATGCATGGGAGTTAGCGAGAGGGAAAGGATTCAGAGCCAGTTGTTGTTGAAAATGTATTCTTGTGATAATTTCAATGTGAAGAAGCAGGAGCTAGAAGATGGAGCAGCAGCAGCACTAACTCTTGGTTGGCTAGATAACCCCCTCTACAGTGTCTCGGCATGGGCACCAGTTGATGCTGCAGGCACTTCATCCTCTGTTTCTCAGCCTATTTGA 2007 0.4773 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQQPSMSTQRLDLPCSFPRKDSSRSQQLRPVGLSVEKPIEAKTGSYSLKQNIRLPPLATTSQAATSTHQINDEFWDKSAKSLKRLAEHESSPKKAKRKKGSSDDVLEGGGGGGEGLSLAQMGAGNFWLQPGLDMTTRTSLPFSLTCSGDEERVCFVPSEVVSAPAPWVESSITKITDLGEKNAEGSHHLPPVKEASPSDSSSESQGLSLRLNENVSEHEVGNGSGIPPHHYQGTEVETGEEDSQEENRGFELVSLLTACVEAIGSKNVATINHFIATLGDLASPKGTSISRLCAYFTEALAIRVTRLWPHIFHITTPRELDRVVVEDETGTALRLLNQVSPIPKFLHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPTMVVMAEQEAQHNEVRLETRVCNALKYYSALFDSIDHCLPRESPMRTKIEEMYAREIRNIIACEGSDRLERHESFVNWRKMMEQGGFRCMGVSERERIQSQLLLKMYSCDNFNVKKQELEDGAAAALTLGWLDNPLYSVSAWAPVDAAGTSSSVSQPI 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3729g00008 668 MobiDBLite consensus disorder prediction 112 146 - -
Gabi3729g00008 668 ProSiteProfiles GRAS family profile. 272 653 IPR005202 -
Gabi3729g00008 668 Pfam GRAS domain family 281 652 IPR005202 -
Gabi3729g00008 668 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 649 IPR005202 -
Gabi3729g00008 668 MobiDBLite consensus disorder prediction 210 276 - -
Gabi3729g00008 668 MobiDBLite consensus disorder prediction 112 133 - -
Gabi3729g00008 668 MobiDBLite consensus disorder prediction 224 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3729g00008 Gabi-Chr3729 116887 118893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3729g00008 1 652 GRAS Transcription Factor Family AT1G63100 57.895 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3729g00008 GRAS 6e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3729g00008 - - tcc:18606459 962.214