Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3728g00001 ATGCAGACACTGAAGAAAAGAAGACCGGCTCAGACGTTATGGCAAAGAGATAAGAGCACAATGTGCTTGTGGAAAATAAACCCCCTTCTTCTTAAAGAGAAAGCAAACACTCAGCCCTTTGATATTCCAACCGTTGGATGTCATAACCGTCAGTTAAGGGACAGTCAAGATGAGGGGCCTAAAGATAGAGATAGTGATGGGACCACTGAGACAGAACGAAGCAAGCTTGTGTTTTTCAATAGGAGGAGTGAGTTTGAGCTTGAGGATTTGCTTCGAGCATCGGCAGAGATGCTTGGGAAAGGTAACTTGGGTACGGTTTACAAAGCAGTGATTGATGATGGATGCACCGTGGCTGTGAAGATACTCAAAGACGCAAACCCATGCGAGAGGAACGAGTTTGAACAGTATATGGATGTTGTAGGGAACCTAAAGCACCCAAACATTGTTAGACTCAGAGCTCATTATTATGCTAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCCCCAACGTCTGTCTATGTTAA 525 0.4362 MQTLKKRRPAQTLWQRDKSTMCLWKINPLLLKEKANTQPFDIPTVGCHNRQLRDSQDEGPKDRDSDGTTETERSKLVFFNRRSEFELEDLLRASAEMLGKGNLGTVYKAVIDDGCTVAVKILKDANPCERNEFEQYMDVVGNLKHPNIVRLRAHYYAKEEKLLVYDYLPNVCLC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3728g00001 174 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 52 173 IPR046959 -
Gabi3728g00001 174 Gene3D Phosphorylase Kinase; domain 1 61 167 - -
Gabi3728g00001 174 ProSiteProfiles Protein kinase domain profile. 92 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3728g00001 174 SUPERFAMILY Protein kinase-like (PK-like) 96 173 IPR011009 -
Gabi3728g00001 174 MobiDBLite consensus disorder prediction 51 70 - -
Gabi3728g00001 174 Pfam Protein kinase domain 95 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3728g00001 174 MobiDBLite consensus disorder prediction 42 70 - -
Gabi3728g00001 174 FunFam pollen receptor-like kinase 1 62 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3728g00001 Gabi-Chr3728 5693 7939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3728g00001 33 173 Receptor kinase-like Gene Family AT2G36570 62.676 7.56e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3728g00001 Pkinase 5.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3728g00001 - - gmx:100808402 204.142