Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3724g00001 ATGGAACCACCGCAGCCAGCTTCTAGAGGAGCTGAAGCAATTAAAAATCTGTCTCCTGGATCATCAATTTCTGTTGCATATCACCCGCTTTTTGGACCTCATGATGATCTCATCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGCATGAAAGGGTGGTCTTAAGAGGACAACCTGATGAAGATGCAGTTCTTTGTACTCAATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAACTCTGTTTTGCTTGTACCACCAGCAAATCAATCAGAATCTTATGAAAATCCACTAAAGAGTGATAGTATTAATTGTGAAGAGAAAGTTGTTGCACCTGTGATCAAACTTGTACCTGGTAATATGGAGCTTAATGAGGTTTCCCCCAGACTTGATAAACTTAAATTGCTTCTTTCAGAGAACCGTTACAGGTTCGAGGAGGATGACATGGAAAACTTAGAAGAGAATCACGAATCTAGAACAGGATTATATAACTGGAATGATCTTACAGACAATATTCAAGCTAGTGATGAGGAATTAAGGTGCGGACTGCAGGCTCTTTCAGCTGTGGAGATTAATGGGTATTGGAGAATAGTAGATGAGAGTTACATGAACATGATTCTGGAAATGCTTTTAAGAAATTCAGTGTTGAATGACTGGTTACTTAATGCTCTAAATGTCGATGAAGTTGTGAGTACGCTGGAATCGGATGGTTTTCCTGGGGTACTTGCAAGACATTGTTTGCATGTATATGGCAAGGAAGTAAATAGTGGCATGGATATCTGGAAGTTGGATGAGAAGCGGGTATGCATTCATTTTGCAAGAGAAATCTTGAGAGGAGGTAAGAGGAAGTTAGAGAGTTTTATGGATGAATGGAGGCAGAAGACTCCTGAAGGAATGCAACCCACTTTTGATCTTGTGGAAGGAGAGGTTTTGACAGAGAGAATTGGAATTGAGACATGGGTTCGCGCCTTCAGTGTTTCTTCTTTGCCTTCCACTCCAGCTGAACGTTTCTCCATTCTTTTTAGGGAGCGGGCAAAATGGGAATGGAAAGATCTTCAGCCCTATATCAGGGATCTGAATGTACCAGGTCTTTCTTTGGAAGGTTTGCTACTCAAATACACTCGAAAGACTCAACCATCGCCTGATAGAGAACCAGTTTTCAGTGCAAGATAG 1182 0.4112 MEPPQPASRGAEAIKNLSPGSSISVAYHPLFGPHDDLILLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANQSESYENPLKSDSINCEEKVVAPVIKLVPGNMELNEVSPRLDKLKLLLSENRYRFEEDDMENLEENHESRTGLYNWNDLTDNIQASDEELRCGLQALSAVEINGYWRIVDESYMNMILEMLLRNSVLNDWLLNALNVDEVVSTLESDGFPGVLARHCLHVYGKEVNSGMDIWKLDEKRVCIHFAREILRGGKRKLESFMDEWRQKTPEGMQPTFDLVEGEVLTERIGIETWVRAFSVSSLPSTPAERFSILFRERAKWEWKDLQPYIRDLNVPGLSLEGLLLKYTRKTQPSPDREPVFSAR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3724g00001 393 Pfam Sister chromatid cohesion protein Dcc1 39 359 IPR019128 GO:0007064|GO:0031390
Gabi3724g00001 393 Coils Coil 138 158 - -
Gabi3724g00001 393 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 9 393 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3724g00001 Gabi-Chr3724 24431 27682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3724g00001 10 393 C3H Transcription Factor Family AT2G44580 56.923 7.03e-159 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3724g00001 K11271 - gmx:100817511 637.106