Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3720g00077 ATGAAGGGAATATGGAATGTAGTGCATGGGTTGAAACCAATCATGCTAATGGTGTTGGTGCAGATTGCATATACTGCGGTCAATGTTCTCTACAAGCTCGCCATTAACGATGGAATGAGTGTGAAGGTTGCCACTGCATACCGCCTCGCTTTCGGTTCTGCTTTCACTGTTCCTCTTGCTCTTATTACTGAAAGGAAGAAGAGACCCAAGCTGACTTGGAGAGTGCTTTTCATGGCATTCTTTTGTGGCTTGTTCGGGGGAAGTTTATTTCAAAACCTTTTCTATGAGGCCCTGGCTTTAACATCTGCAACGTTTGTGTCGGCTATCTACAACCTCGTTCCAGCCATCACCTTTATCTTAGCCATCTCGTGCGGTTTCGAAAGATTAAATTTGAGGGCAGCGGCAGGAAAGGCTAAGGTGTTGGGAACTCTAATTGGAATTGGTGGGGCGATGCTTTTGACCTTTTTCAAAGGAGTAGAAATTAATATCTGGCCCTTCCACATAAACGTTATGCATCCACATCAGCACCAAAATGGCCACGTGGCTGACTCTGGTAGTAATTTGTTGGGTGTTCTCTGTGCCATAGCAAGCTGCTTCTCTTTTGCTCTGTGGCTCACCATTCAGGCTAAGATGAGCAAAGAATACCCAAGCCATTACTCAAGCACAGCTTTGATGTCTACAATGGGAGCAATACAAGCCACTGGTTTTGGTCTTTGTATTGAGAGAGATTGGAGCCAATGGAAGCTAGGTTGGAATATCAGGCTACTTGCTGTTGCTTATTCGGGAATTGTGGCCTCTGGATTAGTGGTTATTGTCATTGCATGGTGCATACAGATGAGAGGGCCTCTATTTGCGTCTGTTTTCAACCCTCTAATGCTCGTGCTTGTGGCAGTTGCCGCTTCTTTAATGTTGGATGAGAACTTATATTTAGGAAGTGTGCTTGGAGCAGTGCTGATTGTGTGTGGCCTATACATGGTTCTATGGGGTAAGAGTAAAGAAATGAAAAAGATTACTCAGTTAGTGCCATCAGAAATCATCGGAGAAGCCGAAGCTATAGAAGTTGTTGTTGCTATGTCCACTTCCATACCAGTAGATCATGATAAATGTCACCACCACAATAACCAAAGCAAAACCAATAATAATACCGGGAACGTTGACAAAGATCATGACGATTTGTCAAAAATTGGAGAAGAAGATGATATTAACAATAGATAG 1215 0.4337 MKGIWNVVHGLKPIMLMVLVQIAYTAVNVLYKLAINDGMSVKVATAYRLAFGSAFTVPLALITERKKRPKLTWRVLFMAFFCGLFGGSLFQNLFYEALALTSATFVSAIYNLVPAITFILAISCGFERLNLRAAAGKAKVLGTLIGIGGAMLLTFFKGVEINIWPFHINVMHPHQHQNGHVADSGSNLLGVLCAIASCFSFALWLTIQAKMSKEYPSHYSSTALMSTMGAIQATGFGLCIERDWSQWKLGWNIRLLAVAYSGIVASGLVVIVIAWCIQMRGPLFASVFNPLMLVLVAVAASLMLDENLYLGSVLGAVLIVCGLYMVLWGKSKEMKKITQLVPSEIIGEAEAIEVVVAMSTSIPVDHDKCHHHNNQSKTNNNTGNVDKDHDDLSKIGEEDDINNR 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3720g00077 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
Gabi3720g00077 404 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016020|GO:0022857
Gabi3720g00077 404 MobiDBLite consensus disorder prediction 367 404 - -
Gabi3720g00077 404 MobiDBLite consensus disorder prediction 383 404 - -
Gabi3720g00077 404 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi3720g00077 404 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Gabi3720g00077 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3720g00077 Gabi-Chr3720 585503 587873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3720g00077 11 388 Nodulin-like Gene Family AT1G25270 40.212 9.24e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3720g00077 - - gmx:100798755 634.795