Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3720g00071 ATGAGTCGGAAGATAGAATTTGAGATCAAAAGCAGAAAATGCATCAAACCTTCAACATCAACTCCTCCACACCTTAAAACCTTCAAACTGTCTCTACTAGACCAGCTTTCCCCTAATATTCATGGCAACATGACCCTCTTCTACCCTTACAATCATGCTTCTGAATCATTCTCCACCAAATCCCAACTTCTTCAAAATTCCCTCTCCCAAACGTTAACCCTTTTCTACCCTTTTGCAGGACGCCTCAAAGATGCCTCCACCATTCATTGCAATGACGAAGGTGCCTTTTTCATCGAAGCTCAAACCGAAACCTCTCTCTCCGACATCCTCGTCAACCCAGATTTCGACACACTCGAATGCTTCCTCCCCACCACCGACAACGAAACCATGACAATGTCGAACGGTTCCATGCTCCTCGTCCGCTTCACCTTGTTCCGTTGCGGTGGCACCGCCCTAAGCATCTCCCTCACCCACAAGATCGCCGATATAGCAGCCTTGATCACACTCCTCAAAACCTGGACCGCCGCGTGTGACGGTGCCACCGAAACGGTGGTTCCTGAACTGGCCACCGGTGCAACTCTCTTTCCTCCTAGAGATATTCCCGGCATGTCAGCTTCTGTAAACACCGTTAGCTCCGAGAAGTTCACAACCAGAAGGTTCGTTTTCGTCGCGTCCAAGGTTGAAGAGCTCAAGGACAGAGTCAAAACCGCACTCGATGAAGGCACGATGTTTTATCCGTCGAGGGTGGAGGTGGTGCTCGCCCTCATTTGGAAATGTGCTTTGTCAGCTTCTAGTTCCAAAACGACGTCGTTTAAGCCTTCGGCTTTGTTCCAAGCCGTGAACCTCCGTCCCCGGATGGACCCGCCAGTTCCGGACACCGCTGTCGGGAACTTCGTGTGGCCATTCGCGGTGACGGTGGAGGAGGATAGCCACGTGGAGTTGCATGAGTTGGTGAAGAGGATGAGGAAGGGTATGAGGGAGTTTCTTGATAGAAAGGCAGAGAAGTTCAAAGAGGAAGGTGCATTTGGTGTGGTGATGGAGACTTTGAAAGAAAGGGGTGAAATTTTGAAGAAGAAGGACAATACAAATACAAGTGTGGTTTATAAGTGTTCAAGTTGGTGTAAGTTTCCATTGCTTGAAACTGATTTTGGGTGGGGGAAGCCTGTGTGGATGTCAAGTGTGAATAAGTTTGGGAGTAATACAATTGCCTTGATGGATACTAAGGATGGTGGAGTTGAAGCTTTTGTGACTCTTGATTTCAAAGAGATGCTTTTATTTGAACAAGATCACCAGCTCCTACGTTATGCTATGCTTAATCCTAGTGTTTTGTAA 1332 0.479 MSRKIEFEIKSRKCIKPSTSTPPHLKTFKLSLLDQLSPNIHGNMTLFYPYNHASESFSTKSQLLQNSLSQTLTLFYPFAGRLKDASTIHCNDEGAFFIEAQTETSLSDILVNPDFDTLECFLPTTDNETMTMSNGSMLLVRFTLFRCGGTALSISLTHKIADIAALITLLKTWTAACDGATETVVPELATGATLFPPRDIPGMSASVNTVSSEKFTTRRFVFVASKVEELKDRVKTALDEGTMFYPSRVEVVLALIWKCALSASSSKTTSFKPSALFQAVNLRPRMDPPVPDTAVGNFVWPFAVTVEEDSHVELHELVKRMRKGMREFLDRKAEKFKEEGAFGVVMETLKERGEILKKKDNTNTSVVYKCSSWCKFPLLETDFGWGKPVWMSSVNKFGSNTIALMDTKDGGVEAFVTLDFKEMLLFEQDHQLLRYAMLNPSVL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3720g00071 443 Pfam Transferase family 7 431 - -
Gabi3720g00071 443 PANTHER F21J9.9 8 436 - -
Gabi3720g00071 443 Gene3D - 212 436 IPR023213 -
Gabi3720g00071 443 Gene3D - 4 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3720g00071 Gabi-Chr3720 525613 526944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3720g00071 5 428 Monolignol Biosynthesis Gene Families AT5G48930 23.947 1.09e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3720g00071 - - gmx:100808502 610.912