Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3720g00065 ATGGGAAGAGGAGAAGAACACACAAAGATAGAAATTGGTCTCTCTTTGCATATAGATCATGCCAATAATCGAAAAGAAGAAGCAAATTCAGATGGGCAAGAAGAAGAGGACGTGGAAGAAATGACGACACAGATACAGGATAAGGAAGAAGCTACAGACGCCACAACTGATCATGAAATAGAAGATCATGCATCAGTACCTGAAATATCGTTGCAAGAGAACAACAATGCACGTGAGTTGAATGTTTTACAAATGGAGATGGATCGCGTAAAAGAGGAAAATAAAGATCTGAGGAAAGTGATGGAACAAACAATGAAAGACTACTGTGATCTACAAATGAAATTTGCTGTCATTGATCAAGAGAACAATAAAAGAAAGGATCTCTCACTTCAAGATAACGCAAACACGAGCAGTGAAGGACCACCACCGACGATTCCTGAGATCTTTGATAACAAAATTCAAGCATCTCCATCCCCAAGAAAAAGTACTGATGATAATAGTATTAACGATAATGAATTGAGTTTATCACTAAGGTTGAGGACAAGCACAAGTCAACAAGAAAAGGAGGTAAATAAAGAAGAAGAACTATCAAGTTTTGCATCAGCGCAGAATAACAAGTTACGAAGGACTCATGACTTGTCTGGTATTAATACGCATGCTGCTTCTTCCCCTCATAATAGAAAAGCTAGGGTTTCAGTCAGAGCTAGATGTGAGGACGCCAAAATGAATGATGGGTGCCAATGGAGAAAATATGGCCAAAAAATTGCAAAAGGAAATCCTTGCCCACGAGCATATTATCGTTGCACTGTAGCCCCAGGATGCCCCGTTAGGAAACAGGTGCAAAGGTGCATGGATGACATGTCGATACTAATCACTACCTATGAAGGAACACATAATCATCCACTTCCTGTGGGTGCAACTGCTATGGCTTCTACAGCTTCTGCAGGTGCTTCTTTTACGTTGCTAGATTCAGATAACACATCAAGTTTCACCCAACCTTCTTTTCCTTACAAAAGCTTCCAGCAGCATCACCCTTTAGATCCATCTTCCAATATTAGAAGCATGAACCCTAATGACCCCACCAAAGGGATTGTTCTTGATCTCACTAGTAATAATATCCATGAGCCACTCCGTTTTCATAGTGGTAGCTCCTCCAATGTGACAGCACAACAGCGTTTTCCTTGGATGCAAAATAAACACCAGAGTGGTATAAATAGTACTCTTGCAATGAACAACTTTCAGAGCCTTATTAGACCAGTGGATCATGAGAAGGTTTTGAAAGCAGAAGAACCTAATTATCTGGTAGCTGATAATGTTTCTGCAATTGCCTCGGATCCTAAGTTCAGGGTTGCAGTTGCAGCTGCCATAACATCACTATTCAATAAAGAAAGCCACGTTACTCATACTGAAGAGACATCTTTTGGTCCAAAGAGTGGACAAAATGGAAGCTCTAGCAGCAGCAATAATTGGATCATAGAATCTCTTTCGAGAAATGGTAAGCACACTTGA 1509 0.4036 MGRGEEHTKIEIGLSLHIDHANNRKEEANSDGQEEEDVEEMTTQIQDKEEATDATTDHEIEDHASVPEISLQENNNARELNVLQMEMDRVKEENKDLRKVMEQTMKDYCDLQMKFAVIDQENNKRKDLSLQDNANTSSEGPPPTIPEIFDNKIQASPSPRKSTDDNSINDNELSLSLRLRTSTSQQEKEVNKEEELSSFASAQNNKLRRTHDLSGINTHAASSPHNRKARVSVRARCEDAKMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCMDDMSILITTYEGTHNHPLPVGATAMASTASAGASFTLLDSDNTSSFTQPSFPYKSFQQHHPLDPSSNIRSMNPNDPTKGIVLDLTSNNIHEPLRFHSGSSSNVTAQQRFPWMQNKHQSGINSTLAMNNFQSLIRPVDHEKVLKAEEPNYLVADNVSAIASDPKFRVAVAAAITSLFNKESHVTHTEETSFGPKSGQNGSSSSSNNWIIESLSRNGKHT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 465 502 - -
Gabi3720g00065 502 FunFam probable WRKY transcription factor 31 227 304 - -
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 155 184 - -
Gabi3720g00065 502 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 45 472 IPR044810 GO:0003700
Gabi3720g00065 502 SUPERFAMILY WRKY DNA-binding domain 236 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3720g00065 502 Pfam WRKY DNA -binding domain 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3720g00065 502 SMART WRKY_cls 242 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3720g00065 502 Gene3D WRKY domain 227 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 1 31 - -
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 44 66 - -
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 471 496 - -
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 126 201 - -
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 338 357 - -
Gabi3720g00065 502 Coils Coil 73 107 - -
Gabi3720g00065 502 ProSiteProfiles WRKY domain profile. 237 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3720g00065 502 Coils Coil 18 38 - -
Gabi3720g00065 502 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3720g00065 Gabi-Chr3720 497729 500509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3720g00065 83 363 WRKY Transcription Factor Family AT1G68150 50.694 1.16e-76 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3720g00065 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3720g00065 - - gmx:100820209 536.954