Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3720g00064 ATGGAGGGTGATCGGAAGCGGTTGAAGCCACGCCTCGAGCGGCGGAACGCCATGAAGAAGATCGATTACGAACCGGACGATGAGATTGAAACAACTTTTTTGGAGAACCAAACCAGCTTCCGAATCGATGGTGAATTCGACCATATATTCAGAAGTTTAGGACTCTCTGGACCCGAAGACTTTGCAATCCCAACAGCAGCTTGGGAACAAGCACAAAAGGCTCGCTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTAAACTTGAAAGTGGTGATGCTGTTGTTGTGCTGAAAAAGCAAGAGAATGAGATTAATAGAGATGGGGGAATCAAAGGTGTCAGGCCTCCCCTTCTGGAACAGCCGCCACCGCCACTTGTTGACAAGGTCACCTCTGCTTGGCATTTGACCAAGTCTCTTCCTCTTCCTCCCCAACATGATGATGTTGTTGTTGTTGTTGGGGAAGAACATGGAATTAGTGATTCTACTTCATCTATGTCCCATGATGATGACGATGATGATGATGATGATAGTGATGTTGGTGATGAAACTGAAAAAGCTGACATGTCCATTCATAATGTCTCGCCAAATGGGTCATTTACACGAACTTTCAAGTCTTGGCAAAAGGGCGAGGTTTTAGGAAAGGGGTCATTCGGAACGGTCTATGAAGGCTTCACTGATGATGGGGACTTTTTTGCGGTAAAGGAGGTGTCTTTGCTGGATGAAGGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTCAGTTTAAACACGAGAACATAGTTCGATATATTGGCACAGACAAGGACAATGACAAGCTGTATATCTTCCTTGAGCTTGTGACAAAAGGATCATTGGCAAGTCTCTATCAAAAGTATAGTTTGAGGGACTCTCAAGTTTCTGCATACACAAGGCAGATTTTAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAGATGGGTTCGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAAGCAAAGGCTCTCCATACTGGATGGCCCCTGAGGTTGTTAACCTAAGGAATCGTGGTTATGGATTAGCAGCTGATATATGGAGCTTAGGATGTACAGTTCTAGAGATGTTGACACGGCAACCTCCTTACTCTCATTTGGAAGGAATGCAAGCGTTATTTAGGATTGGAAGGGGTCAACCTCCACCTATTCCCGAATCTTTATCAGAAGATGCAGGAGATTTCATTCTTAAATGCTTACAAGTCAACCCAAATAAACGGCCAACTGCTGCTCAGTTATTGGATCATCCATTCGTAAAGAGACCACTTCTATCTCCCATAAGTCTTGTTTCTCCACGTACTAGTCTTTTACTGTCTTAA 1446 0.4357 MEGDRKRLKPRLERRNAMKKIDYEPDDEIETTFLENQTSFRIDGEFDHIFRSLGLSGPEDFAIPTAAWEQAQKARFFSSSSSSSSPPPKLESGDAVVVLKKQENEINRDGGIKGVRPPLLEQPPPPLVDKVTSAWHLTKSLPLPPQHDDVVVVVGEEHGISDSTSSMSHDDDDDDDDDSDVGDETEKADMSIHNVSPNGSFTRTFKSWQKGEVLGKGSFGTVYEGFTDDGDFFAVKEVSLLDEGSQGKQSIFQLQQEISLLSQFKHENIVRYIGTDKDNDKLYIFLELVTKGSLASLYQKYSLRDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDADGFVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGQPPPIPESLSEDAGDFILKCLQVNPNKRPTAAQLLDHPFVKRPLLSPISLVSPRTSLLLS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3720g00064 481 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 124 465 - -
Gabi3720g00064 481 MobiDBLite consensus disorder prediction 160 195 - -
Gabi3720g00064 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Gabi3720g00064 481 Pfam Protein kinase domain 209 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3720g00064 481 MobiDBLite consensus disorder prediction 74 89 - -
Gabi3720g00064 481 MobiDBLite consensus disorder prediction 74 94 - -
Gabi3720g00064 481 ProSitePatterns Protein kinases ATP-binding region signature. 214 236 IPR017441 GO:0005524
Gabi3720g00064 481 Gene3D Transferase(Phosphotransferase) domain 1 205 474 - -
Gabi3720g00064 481 SMART serkin_6 208 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3720g00064 481 SUPERFAMILY Protein kinase-like (PK-like) 205 472 IPR011009 -
Gabi3720g00064 481 MobiDBLite consensus disorder prediction 168 184 - -
Gabi3720g00064 481 ProSiteProfiles Protein kinase domain profile. 208 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3720g00064 481 FunFam Mitogen-activated protein kinase 1, putative, expressed 206 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3720g00064 Gabi-Chr3720 480798 485996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3720g00064 3 73 MAP Kinase Kinase Kinase AT4G08500 40.217 1.50e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi3720g00064 Pkinase 4.3e-72 CL0016