Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3720g00054 ATGGCTCAGGAAAGAGACGGTGCAATGTTTGCTCTAGTATTAATATTCTGCGTGTTGGTGCTTCACTCTGAGATGGTTCATGCAGACACCCATATAGTTGGAGATGGAGGTGGTTGGTCCTTTAATGTTGGTATCTGGCCTAAAGGAAAGAGTTTCAAGGCTGGTGATATCCTTGTTTTCAAATATAATCCTTTTGCTCACGACGTGCTGGTAGTGAACGAGGCTGGTTACAATACATGCGATCCTTTTTTTGGAGAAAGATTGTTTTTTTCAGGAAATGATCAAATACAGCTTGCCCGGGGAATGAACTACTTCATCTGCGGTTTTCCTGGTCATTGCCTGCGTGGGATGAAATTTGCAATCAATGCTGCATGA 375 0.4293 MAQERDGAMFALVLIFCVLVLHSEMVHADTHIVGDGGGWSFNVGIWPKGKSFKAGDILVFKYNPFAHDVLVVNEAGYNTCDPFFGERLFFSGNDQIQLARGMNYFICGFPGHCLRGMKFAINAA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3720g00054 124 FunFam basic blue protein-like 29 123 - -
Gabi3720g00054 124 CDD Plantacyanin 30 123 IPR041844 -
Gabi3720g00054 124 ProSitePatterns Type-1 copper (blue) proteins signature. 101 117 IPR028871 -
Gabi3720g00054 124 ProSiteProfiles Phytocyanin domain profile. 29 124 IPR003245 GO:0009055
Gabi3720g00054 124 Pfam Plastocyanin-like domain 44 117 IPR003245 GO:0009055
Gabi3720g00054 124 PANTHER BLUE COPPER PROTEIN 22 122 IPR039391 GO:0009055
Gabi3720g00054 124 SUPERFAMILY Cupredoxins 30 123 IPR008972 -
Gabi3720g00054 124 Gene3D - 27 124 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3720g00054 Gabi-Chr3720 402212 404205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3720g00054 10 123 Phytocyanin Superfamily AT1G17800 41.667 1.33e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3720g00054 - - gmx:100818617 176.792