Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3720g00008 ATGGAGTATGCAGCAGGTGGAGAGCTCTTTGAGCGAATTTGCAATGCTGGAAGATTCAGCGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGCCATCGAGACCTGAAGCTAGAGAACACCTTATTGGATGGCAGCCCTGCCCCTCGTCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCTAGGCCCAAGTCAACAGTGGGAACTCCAGCCTATATTGCACCAGAAGTTCTTTCCCGCAGGGAATATGATGGAAAGTTGGCAGATGTATGGTCATGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAGGACCAAGAGGATCCCAAAAATTTCAGGAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGTAGAAATCTGCTATCTCGCATTTTTGTGGCAAATCCAGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCACCCATGGTTTTTAAAGAACTTGCCTAGAGAATTGACAGAAGTGGCTCAAGCTGTCTACTACAGAAAAGAAAACCCTACCTTTTCTCTTCAGAGTATAGAAGACATCATGAATATTGTCGAGGAGGCCAAAGCTCAACCTCAAGCATCTAGGTCAATTGGAGGGTTTGGCTGGGGAGGGGTGGAAGAAGAAGATGAAACAAAAGAAGAAGCAGAGGCTGAGGGGGAAGAAGATGAGTATGAAAAGAGAGTCAAGGAGGCACAGGCTAGCGGAGAATTTCATGTCAGTTAA 831 0.4428 MEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRNLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKENPTFSLQSIEDIMNIVEEAKAQPQASRSIGGFGWGGVEEEDETKEEAEAEGEEDEYEKRVKEAQASGEFHVS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3720g00008 276 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3720g00008 276 PANTHER SERINE/THREONINE KINASE 1 224 - -
Gabi3720g00008 276 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3720g00008 276 Coils Coil 241 270 - -
Gabi3720g00008 276 MobiDBLite consensus disorder prediction 230 276 - -
Gabi3720g00008 276 Gene3D Transferase(Phosphotransferase) domain 1 1 233 - -
Gabi3720g00008 276 FunFam Serine/threonine-protein kinase SRK2A 4 192 - -
Gabi3720g00008 276 SUPERFAMILY Protein kinase-like (PK-like) 1 217 IPR011009 -
Gabi3720g00008 276 MobiDBLite consensus disorder prediction 243 257 - -
Gabi3720g00008 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Gabi3720g00008 276 Pfam Protein kinase domain 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3720g00008 Gabi-Chr3720 58598 61448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3720g00008 1 187 CBL-interacting serine-threonine protein kinases AT4G24400 46.875 2.11e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gabi3720g00008 Pkinase 5.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3720g00008 K14498 - gmx:100812259 521.546