Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi371g00011 ATGGCTCATCAAGCTCAAGAGATACAGCTAGCTAGGGATTTGGTGGGACAAGGTCAAGCTGATGGTAATGAGAATCCTAATGTGGCTGCTGAAGTTGGGAATGCAAACAGAGTGAGTGTTGTAATGGTGTCATTAGATGACACTGGTCCTTGTATTCGGCTAATCTGGTCTATTGGTGCTCTTATGCTCTATATAGCAATTGGATTGAGTGTGTACTTGACAAGTCACAATTTCAATCGCAGTTACACAAAACATTTTGTAGATGGCATTTACTTCATAATGGTAACACTATCTACAAACGGATATGGAGATATCACACCAAAAAATACAAGTATGAAGGTCTTTACAAGTTTTTATACATTGCTGGGTTTTTGGATCTATGGTCCTCTCGTCGAAAAGACGATGGAATATATTTGTTATAAATTGGAGGCGGCATTGTGCAGAATAATACAAAAATACAAATGCTTATTGATATTCATATGCATGGTGGACATACACGAAGTAAGATTCAGGACACGATTCAGGATTTGCATGGCTTTAGGGATTATCATTCTCTGGATTGCTATAGGACTAATTGGAGTGCATTATTTTGAGCACAAGAATTTGGTCGATAGTTTCTATCTCACCATGGTATCTATCTCCACAGTTGGATATGGAGATTTATCGTTCCAAACACTAAACGGAAGATGCTTCGCATTTATTTGGCTATTTGGATGCATACTGATAGTAAGGAGAACATTTAATTACCTCATTGGCAGTGGTATAGATTGGCTCACTACTAACACTAGGAGGATCACAATACCAAGACAAGTATTGGAGGCTGACATTGATATGGACAAATCGATCTGTAAAGCTGAGTTTATCTTACAAATTCTAAAGCAAAGGGGAAGTGTAACGACGGAGCAAAACATTCAAGAAATAAGCCAAATCTTCAATTCCTTAGACAGTCGCAATGGCAAACTCAGTTTAGAAGCTCTTGCTGCCTATCTTGCTGCCCAGCCAAGAGATGTCTAG 1014 0.3876 MAHQAQEIQLARDLVGQGQADGNENPNVAAEVGNANRVSVVMVSLDDTGPCIRLIWSIGALMLYIAIGLSVYLTSHNFNRSYTKHFVDGIYFIMVTLSTNGYGDITPKNTSMKVFTSFYTLLGFWIYGPLVEKTMEYICYKLEAALCRIIQKYKCLLIFICMVDIHEVRFRTRFRICMALGIIILWIAIGLIGVHYFEHKNLVDSFYLTMVSISTVGYGDLSFQTLNGRCFAFIWLFGCILIVRRTFNYLIGSGIDWLTTNTRRITIPRQVLEADIDMDKSICKAEFILQILKQRGSVTTEQNIQEISQIFNSLDSRNGKLSLEALAAYLAAQPRDV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi371g00011 337 SUPERFAMILY Voltage-gated potassium channels 52 142 - -
Gabi371g00011 337 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 84 286 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi371g00011 337 Gene3D - 156 269 - -
Gabi371g00011 337 Gene3D - 52 144 - -
Gabi371g00011 337 Pfam Ion channel 182 248 IPR013099 -
Gabi371g00011 337 Pfam Ion channel 61 137 IPR013099 -
Gabi371g00011 337 PRINTS Two pore domain K+ channel signature 95 123 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi371g00011 337 PRINTS Two pore domain K+ channel signature 214 223 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gabi371g00011 337 SUPERFAMILY Voltage-gated potassium channels 166 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi371g00011 Gabi-Chr371 100669 102317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi371g00011 61 323 Ion Channels AT4G18160 34.909 4.24e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi371g00011 K05389 - cit:102629027 187.578