Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3718g00004 ATGGGGTCCAAACTCAGCAACAAAGAAGGCTCTTGGAGCTCTCCAACAAGGCTCAAAGATGCTGACTTTAAGGAATCACGAAAATACAACACAAGGAAGATACAAAAGGGTCTTTCACTCTTTGTACACAGAAGGCCTGAACTAAGGTACTTCAATGAAGATCTTGTGGAAGCCACAACTATGGTGCCAGATGATGTTAGGGAAGGATATTTTGTTGTTCTTGCAACTAAGGATGGAGAAACCAAAAGGTTCATTGTTGAGTTAAACTACTTGACTGATCCTTCATTCTTGGGACTACTCGACCAAGCTCAGGAAGAGTATGGTTTCGGACAACAGGGAGTTCTTGCTGTCCCTTGTCGACCTCAAGAATTACAAAAGATTCTAGATGGTCTCAGAGAGTAG 402 0.4254 MGSKLSNKEGSWSSPTRLKDADFKESRKYNTRKIQKGLSLFVHRRPELRYFNEDLVEATTMVPDDVREGYFVVLATKDGETKRFIVELNYLTDPSFLGLLDQAQEEYGFGQQGVLAVPCRPQELQKILDGLRE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3718g00004 133 Pfam Auxin responsive protein 60 129 IPR003676 GO:0009733
Gabi3718g00004 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 127 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3718g00004 Gabi-Chr3718 47450 50238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3718g00004 63 128 Calmodulin-binding Proteins AT3G43120 39.394 2.03e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3718g00004 - K14488 gmx:106795483 154.836