Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3716g00003 ATGGCATGTGAGAAGGCATCCCTCAAGCTTGACATGAAAGAAGTTGTACTTGTGAAACCATCAAATCCCACACCTTCTTCAGTTCTTTCTATGTCTACACTTGACAATAGACCCGACCTTAATAGTCTTTGTCAAACCGTTCATGTATATAGATCAGCAAATCATGATACCCCTAATGGCCAAGTTCTAGACCCTGTTCATGTGATCAAAGAAGCACTCTCAAAGGTTTTGCTTTATTATTATCCTCTTGCAGGTAGGCTAGTGAAACACGTTGATGGAAAACTTAGAGTCAACTGCAACGCAGACGGTGTTCCATTCTTGGAGGCAATCGCAAACTGCGACCTTACTTCTCTTCATTACTTGGATGGCACTGATACAAAAATTACCAAACATCTGGTGTTTCATCTTTCTAATTCTCAAGAGGAAAATGGCTACCAATATCCCATGGTGTTCCAGGTAACCAAATTTCTATGTGGGGGTTTCACAATTGGAATTGGGGTGTTACACTCTATTTGTGATGGTTATGGAGCATCTCAATTCTTCACAGCCTTAGCTGAACTTGCAAGTGGAAAAAGTGAGCCCTCCGTGAAACCTGTGTGGGATAGAGAGAGACTAGTTGGAACAATAACTAAGCAACCATTGCAAAGCCCCATGGATGAGGCTTGTGCTGCAGTTTCACCGTTTCTGCCAACAACAGTTCTTATGCACGAATGCTTTAAAGTGGACAGTGAGAGCATAAGAAGACTCAAGATGAGTATGGAGAACGAAAGCTTCACAACTTTTGAATCACTTGCTGCCTATGTGTGGAGGTCAAGAGCCAGAGCCTTAAAACTGAGCTACGATGGGAAAACTATGCTAGACATCATGGTGGGAGTGAGACCGCACTTGCTGGATTCTCCTTTGCCTGATGGCTATTATGGGAATGCTATTGTGGATGCAAATGTTGTGCTAACAGTGAGGGAACTCAACGAACGACCACTATCAGAGATCGTGAAGCTCATCAAGGAGACTAAAAATGTTGCTTTTACCACTGATTATATCAGAAACACAATCAACACTTTGGAGACGAAACAAGAGGATCATAACATGGCACTCACGACTTTGACTGAGTGGAAGCATTTGGGTTTCTTGGAAAGGGTGGATTTTGGTTGGGAGGAACCTGTAAATATAATACCCGCCCCATGCGACTTGTTTCAGTCCGTGGATTTGTGCATTTTCGCGTCTCCTAATAACTTTGATCCATCAATGAAAGGAGGAGTTAGGATTTTCTCATCCCTCCCTATTGCTGCCATGCCCAAGTTCAGGGAGGAGATGGAAGCTCTCCGGTCAATTAAACCCTAG 1341 0.4325 MACEKASLKLDMKEVVLVKPSNPTPSSVLSMSTLDNRPDLNSLCQTVHVYRSANHDTPNGQVLDPVHVIKEALSKVLLYYYPLAGRLVKHVDGKLRVNCNADGVPFLEAIANCDLTSLHYLDGTDTKITKHLVFHLSNSQEENGYQYPMVFQVTKFLCGGFTIGIGVLHSICDGYGASQFFTALAELASGKSEPSVKPVWDRERLVGTITKQPLQSPMDEACAAVSPFLPTTVLMHECFKVDSESIRRLKMSMENESFTTFESLAAYVWRSRARALKLSYDGKTMLDIMVGVRPHLLDSPLPDGYYGNAIVDANVVLTVRELNERPLSEIVKLIKETKNVAFTTDYIRNTINTLETKQEDHNMALTTLTEWKHLGFLERVDFGWEEPVNIIPAPCDLFQSVDLCIFASPNNFDPSMKGGVRIFSSLPIAAMPKFREEMEALRSIKP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3716g00003 446 PANTHER ACYL TRANSFERASE 4 10 439 - -
Gabi3716g00003 446 Gene3D - 5 217 IPR023213 -
Gabi3716g00003 446 Pfam Transferase family 9 440 - -
Gabi3716g00003 446 Gene3D - 231 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3716g00003 Gabi-Chr3716 52837 54177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3716g00003 8 393 Monolignol Biosynthesis Gene Families AT5G48930 27.913 1.32e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3716g00003 K20240 - gmx:100801843 562.762