Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3716g00002 ATGGCATATGAGAAGGCATCCCTCAAGCTTGACATGAAAGAAGTTGTACTTGTGAAACCATCAAATCCCACACCTTCTTCAGTTCTTTCTATGTCTACACTTGACAATAGACCCGACATCAATAGTCTTTGTCAAACAGTTCATGTATATAGATCAGCAAATCATGATACCCCTAATGGCCAAGTACAAGACCCTGTTCATGTGATCAAAGAAGCACTCTCAAAGGCTTTGCTTTATTATTATCCTCTTGCTGGTAGGCTACTGAAACACGTTGATGGAAAACTTAGAGTCATCTGCAATGCAGATGGTGTTCCATTCTTGGAGGCAATTGCTAACTGCGACCTTACTTCTCTTCATTACTTGGATGGCACTCACACAACAATTACCAAACACTTGGTGTTTCATCTTTCTAATTCTCAAGATGAAAATGGCTACCAATATCCCATGGTGTTCCAGGTAACAAAATTTCTATGTGGGGGTTTCACAATTGGAATGGGGGTGTCACACTCTATTTGTGATGGTCATGGAGCATCTCAATTCTTCAGAGCCTTAGCTGAACTTGCTAGTGGAAAAAGTGAGCCATCTGTGAAACCTGTGTGGGATAGAGAGAGACTAGTTGGAACAATAACAAAGCAACCATTGCAAAGCCCCATGGATGAGGCTTGTGCTGCAGTTTCACCATTTCTGCCAACAACGGTTCTTACGCATGAATGCTTTAAAGTGGACAGAGACAGCATAAGAAGACTCAAGATGAGTTTGAAGAAGGAAAGCTTCACAACTTTTGAATCACTTGCTGCCTATGTGTGGAGGTCAAGAGCCAGAGCCTTAAAACTGAGTTACGATGGGAAAACTATGCTAAATATCTTGGTGGGAGTGAGACAACATTTGCTGGATTCTCCTTTGCCTAATGGCTATTATGGGAATGCTATTGTTGATGCAAATGTTGTGCTAACAGTGAGGGAACTCAACGAAAGGCCACTATCAGAGATCGTGAAGCTCATCAAGGAGACTAAAAATGCTGCTTTTACCACTGATTATATCAGAAACACAATCAACACTTTGGAGACGAAACAAATGTACTCTGACATCGATGGTAGTCGTGCACTCACGATTTTGTCTGAGTGGAAGCATTTGGGTTTCTTGGAAAAGGTGGATTTTGGTTGGGAGGAACCTGTAAATATAATACCCGCCCCATGCGACTTGTTTGAGTACGTGAATTTGTGCATTTTTGCACCTCCTAATAACTTTGATCCATCAATGAAAGGAGGAGTTAGGATTTTCTCATCCCTCCCTATTGCCGCCATGCCCAAGTTCAGGGAGGAGATGGAAGCTCTCAGGTCAATTCAACCCTAG 1353 0.422 MAYEKASLKLDMKEVVLVKPSNPTPSSVLSMSTLDNRPDINSLCQTVHVYRSANHDTPNGQVQDPVHVIKEALSKALLYYYPLAGRLLKHVDGKLRVICNADGVPFLEAIANCDLTSLHYLDGTHTTITKHLVFHLSNSQDENGYQYPMVFQVTKFLCGGFTIGMGVSHSICDGHGASQFFRALAELASGKSEPSVKPVWDRERLVGTITKQPLQSPMDEACAAVSPFLPTTVLTHECFKVDRDSIRRLKMSLKKESFTTFESLAAYVWRSRARALKLSYDGKTMLNILVGVRQHLLDSPLPNGYYGNAIVDANVVLTVRELNERPLSEIVKLIKETKNAAFTTDYIRNTINTLETKQMYSDIDGSRALTILSEWKHLGFLEKVDFGWEEPVNIIPAPCDLFEYVNLCIFAPPNNFDPSMKGGVRIFSSLPIAAMPKFREEMEALRSIQP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3716g00002 450 Gene3D - 230 442 IPR023213 -
Gabi3716g00002 450 Pfam Transferase family 9 444 - -
Gabi3716g00002 450 Gene3D - 5 217 IPR023213 -
Gabi3716g00002 450 PANTHER ACYL TRANSFERASE 4 10 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3716g00002 Gabi-Chr3716 24989 26341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3716g00002 8 415 Monolignol Biosynthesis Gene Families AT5G48930 27.778 3.65e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3716g00002 K20240 - gmx:100801843 571.237