Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi370g00004 ATGGCTTTCCCTTGTTCTGCATCCCTTTCCAAGAAGGTTCTCTTCATAATGGGTTCAACTGGCACCGGAAAAACCAAACTTTCCATCAACTTGGGCATGCAATTTCCCTCTGAAATTATCAACTCTGACAAAATCCAAGTATACAAGGGTCTTGACATTGTAGTGAACAAGATACCAAAATCTGAACGTTGTGGCATTCCCCATCACTTGTTAGATGTCATTGAAAATCTTGATTATGACTTCACTGTTGATGACTTTTGCAAGCAGGCAATTGCTGCTATTGATCTCATTCATGAAAATGGGCACTTGCCCATAATTGTTGGAGGCTCCAATAACTATTTAGAAGCACTAGTGGAGGACCCCAACAATGCATTTCGTTCCAAATATGAATGTTGCTTCATTTGGCTTCATGTGTCTTTGCCTGTGTTATTTCAATACTTAGACAAAAGGGTTGATGAAATGGTGGATGCAGGGCTTGTGGATGAGATTCGAAGAGCTTTTGTCCCTGGAGCAGATTACTCTAATGGGATTAGAAGAGCCATTGGAATTCCTGAGTTTGAACAATATATTCTGGTGGAGAAAGAAACAAATGATGAGGCTTATAGACAAAAGATATTTCACGATGCAATTAAGAAAACTAAAGAAAATACTCGTGTGTTGGCTGAAGTTCAACTTGGGAAGATCCAAAGGCTAAATGATGAGCTTGGATGGGGAATGAACATGATTGATTCTACTGAAGTGTTTGAGGCTATTTTAAAAGGAGAAAATTATAAGGATTTGTACCAAGAGATTGTATCTGATCCAAGCATGGATATAGTGAAAAGGTTTCTAGAGGAGACAACAGAAGACCTTACAAGTTACCAAAATGGTGAAGAAGCAGAAAATTGTGCTTAA 894 0.3859 MAFPCSASLSKKVLFIMGSTGTGKTKLSINLGMQFPSEIINSDKIQVYKGLDIVVNKIPKSERCGIPHHLLDVIENLDYDFTVDDFCKQAIAAIDLIHENGHLPIIVGGSNNYLEALVEDPNNAFRSKYECCFIWLHVSLPVLFQYLDKRVDEMVDAGLVDEIRRAFVPGADYSNGIRRAIGIPEFEQYILVEKETNDEAYRQKIFHDAIKKTKENTRVLAEVQLGKIQRLNDELGWGMNMIDSTEVFEAILKGENYKDLYQEIVSDPSMDIVKRFLEETTEDLTSYQNGEEAENCA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi370g00004 297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 167 IPR027417 -
Gabi370g00004 297 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 140 239 - -
Gabi370g00004 297 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 11 277 IPR039657 -
Gabi370g00004 297 Gene3D - 11 277 IPR027417 -
Gabi370g00004 297 FunFam Adenylate isopentenyltransferase 5, chloroplastic 140 239 - -
Gabi370g00004 297 Pfam IPP transferase 46 121 - -
Gabi370g00004 297 Pfam IPP transferase 126 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi370g00004 Gabi-Chr370 107037 107930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi370g00004 127 294 C2H2 Transcription Factor Family AT2G27760 30.412 9.85e-20 87.0