Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi370g00001 ATGCGAATGAGTTGTAATGGATGTCGGGTATTACGAAAAGGTTGTAGTGAAGATTGTAGCATAAGACCGTGTTTGGAGTGGATCAAGAGTTCACAATCACAAGCCAATGCAACTCTGTTCCTTGCTAAATTCTATGGTCGTGCTGGCCTCATGAATCTCATCAACGCTGGTCCTCACCACCTTCGTCCAGCGATTTTTCGTTCGTTGTTATACGAGGCATGTGGGAGGATCGTGAACCCGATTTATGGGTCGGTGGGTTTGTTGTGGTCGGGGAGCTGGCAGCTTTGTCAAGCCGCCGTTGAAGCCGTCTTGAAGGGTTCGCCAATAACTCCGATAACCTCCGATGCGGCGGCGTTTGGGCGGGGTCCACCACTTAAGGCCTACGACATACGCCACGTGTCCAAGGATGAGAACTTGGCCGCTTTACATGAAGGTCACCGAGTCAAGACTCGGTCCCGGTTCAAGAGAACCGGAAGTGGAGCCATCATCAAGCCTAAGACCCTCAAAGGAACCGAGGCCGGTTCTTCTGAACCGGATGTGGAGAACCGGTCGGCTAGTCATGAGTCTACGCTGAGCCGTCAGTCCGAGGCAGCGATGGCGGAGAGTGTGGTATCCGTGGAGACTTCGATCCTCTTCCATGATGAACCGGAGTCAAACGTGAAGGTGAGTGACCGAGCCGATGAGAGTGGTGGTGATGTTGGTTTAGAGCTGACGCTCGGGTTCGAACCGGATTCACGTGCGCATCACGTGATTCCCATGAAGAAGAGAAGGATTGAGTTGAAGGATTGGGAGAGCGGTTCATGCAAGATGGAATTGGGTCTTGAGTTTCCGGTTTGA 837 0.5245 MRMSCNGCRVLRKGCSEDCSIRPCLEWIKSSQSQANATLFLAKFYGRAGLMNLINAGPHHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGSPITPITSDAAAFGRGPPLKAYDIRHVSKDENLAALHEGHRVKTRSRFKRTGSGAIIKPKTLKGTEAGSSEPDVENRSASHESTLSRQSEAAMAESVVSVETSILFHDEPESNVKVSDRADESGGDVGLELTLGFEPDSRAHHVIPMKKRRIELKDWESGSCKMELGLEFPV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi370g00001 278 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Gabi370g00001 278 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 239 - -
Gabi370g00001 278 PIRSF AS2 1 277 IPR017414 -
Gabi370g00001 278 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gabi370g00001 278 MobiDBLite consensus disorder prediction 165 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi370g00001 Gabi-Chr370 72214 73632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi370g00001 1 274 AS2 family AT3G02550 59.155 1.15e-106 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi370g00001 LOB 3.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi370g00001 - - aprc:113867933 417.157