Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3704g00004 ATGCTTACATGCATAGCACGTCCTAAGAAACTCGGGGAGGACTCGGTGAGTCACGTCGACGATTCGGACCCAAGCAACAATGCGAAAAACCAAGCTGTGAAGTCCCTCACATGTCAGATAAAGGACATGGCGTTGAAGGCTTCGGGGGCGTACAAGCACTGTAGCCCGTGCGCGGCGCAGAGTCGACTCAGAAGCGGAGCCGCCGAGTCTGACGCGGACTCGGAGCGGTTCCGGCGGTCGTACCGGAGGACGAGGACTTGGGGAAAGGAGATGGAGGCGAGGCTCAAGGGGATTTCCAGCGGGGAGGGGACGCCGAGCTCAGCCACCGGGAGCAGCCGGAGAGTGGTGCTGCTGATGGAAGATGACGAGCCTAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTTTGATCACCTTCGTGTCGCTTCCGCGTGGCGGGAACGATCTCAAGAGGATCCGCTTCAGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGTTTAACCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCAAAGCGTGAATCGGTAGAAGACAGCCCTGTCACACCTCCACTGACTAGGGAACAGCTACCTCGTAATTTATACCGTCCAGCAGGGATTGGAATGGGGTACTCATCCTCAGATTCCTTTGATCATCAATCAATGCAATCCCGGCATTACTATGACTTGAGTGGTATGAACTCTACCCCAAAGGTGTCCACCATTAGTGCTGCCAAGACGGATATATCATCAATGGATGCTTCTATAAGAAGTAGCTCATCTAGAGAAGCCGATCGCTCTTGTGACCTATCAATCAGCAATGCCAGTGACTTGGAGACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCTCTGCCAGGTGGCAAAAGGGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGACTATGGTGGGAAGAGAACCGCGCCAGAATACATGAAAAATACTTGTGA 1080 0.5269 MLTCIARPKKLGEDSVSHVDDSDPSNNAKNQAVKSLTCQIKDMALKASGAYKHCSPCAAQSRLRSGAAESDADSERFRRSYRRTRTWGKEMEARLKGISSGEGTPSSATGSSRRVVLLMEDDEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRFNRQAFPLPTPPRSEDESSKRESVEDSPVTPPLTREQLPRNLYRPAGIGMGYSSSDSFDHQSMQSRHYYDLSGMNSTPKVSTISAAKTDISSMDASIRSSSSREADRSCDLSISNASDLETEWVEQDEPGVYITIRALPGGKRELKRVRFSREKFGEMHARLWWEENRARIHEKYL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3704g00004 359 MobiDBLite consensus disorder prediction 188 223 - -
Gabi3704g00004 359 MobiDBLite consensus disorder prediction 10 30 - -
Gabi3704g00004 359 ProSiteProfiles BRX domain profile. 304 359 IPR013591 -
Gabi3704g00004 359 ProSiteProfiles BRX domain profile. 125 180 IPR013591 -
Gabi3704g00004 359 Pfam Transcription factor regulating root and shoot growth via Pin3 125 179 IPR013591 -
Gabi3704g00004 359 Pfam Transcription factor regulating root and shoot growth via Pin3 303 358 IPR013591 -
Gabi3704g00004 359 Pfam Transcription factor BRX N-terminal domain 24 57 IPR027988 -
Gabi3704g00004 359 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 359 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3704g00004 Gabi-Chr3704 37131 43045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3704g00004 1 359 Major Intrinsic Protein MIP AT1G31880 44.974 1.42e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3704g00004 - - gmx:100794109 575.474