Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3700g00037 ATGGAAGAAGTTGTCCTTACAGACAGTGAAGTTCAACCAACCTCCTCCTCCTCTTTCACCATTATTGCCTCCACCGCCTCCTCTTCTTCCTTTTCCTCTTCCTCTTCCTCCTCCACAGAAGAAGCCACTAATACCACCCACAAGAAAACTCATCAAGGCGAAGAATTAGGTAGTGATGGAAACAACAACGAGAAGAAAAAGAAGAAGAAGAAGAGAGGCATTGATGGGAAGCACCCAACATATAGAGGAGTACGTATGCGTCATTGGGGCAAATGGGTATCCGAAATCAGAGAGCCAAGGAAGAAATCAAGAATTTGGCTTGGCACTTTTCCCACCCCTGAGATGGCGGCTCGAGCGCATGACGTGGCGGCTCTCACTATCAAAGGTAGCTCGGCTTACCTCAATTTCCCCGAACTAGCAGCCGAGCTCCCACGCCCAACCACTACATCCCCTAAGGACATCCAAGCCGCTGCCGCTAAAGCCGCTGCCATAAACTACCACCATCGAAGCCATGAAGCCGAATCCGAGCTGATCCAAGCCGTTTCCTTCTCGAGTCACACCCAAGGATCATCCAGTTCATCGTTGAAGGGTGAGGATGACACATTCTTTGACCTTCCTGATCTTTCACTCGAGTTGAATCATAGTGCTGATGAGTTTCATTACTCTTCGGCTTGGCTTATAGCCGGAGCCGAACATATAGACTCATGTTTCCGGCTTGAAGAGCCTTTTCTTTGGGAGTCATATTAA 747 0.4873 MEEVVLTDSEVQPTSSSSFTIIASTASSSSFSSSSSSSTEEATNTTHKKTHQGEELGSDGNNNEKKKKKKKRGIDGKHPTYRGVRMRHWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALTIKGSSAYLNFPELAAELPRPTTTSPKDIQAAAAKAAAINYHHRSHEAESELIQAVSFSSHTQGSSSSSLKGEDDTFFDLPDLSLELNHSADEFHYSSAWLIAGAEHIDSCFRLEEPFLWESY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3700g00037 248 FunFam Ethylene-responsive transcription factor 2 79 138 - -
Gabi3700g00037 248 Pfam AP2 domain 79 129 IPR001471 GO:0003700|GO:0006355
Gabi3700g00037 248 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Gabi3700g00037 248 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Gabi3700g00037 248 Gene3D AP2/ERF domain 80 138 IPR036955 GO:0003700|GO:0006355
Gabi3700g00037 248 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Gabi3700g00037 248 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Gabi3700g00037 248 MobiDBLite consensus disorder prediction 24 43 - -
Gabi3700g00037 248 SUPERFAMILY DNA-binding domain 80 138 IPR016177 GO:0003677
Gabi3700g00037 248 CDD AP2 81 139 IPR001471 GO:0003700|GO:0006355
Gabi3700g00037 248 MobiDBLite consensus disorder prediction 24 81 - -
Gabi3700g00037 248 MobiDBLite consensus disorder prediction 44 64 - -
Gabi3700g00037 248 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 50 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3700g00037 Gabi-Chr3700 244635 245493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3700g00037 67 244 AP2-EREBP Transcription Factor Family AT2G44940 51.185 1.43e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3700g00037 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3700g00037 - - gmx:100812293 306.219