Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3698g00065 ATGGACAAAGGATGGTGTCTAACCCTTGATACTTCTTCTTCTTCCTCTCCTTTCTTTCCTTCCAAACAGCCACCTACCACTTCTTTGAATCCTTTCTCCAATCTCACCCAGGATAGGATGTTCCCCCTCTTGGGATTCCCGGTTAACCTTAGCCGTGCCGCCAACAGGGAAGATGATCACACCACTGATGACAACCGGAAGGTGGTTGGTGAAGTTGACTTCTTCTCTGACAGAAACAAGCCATCACCTCCAGCTATCCACGACCATGATAATATTAATCATCAACATGTTAAACCCAACATCACAAGTACCTCTGTCAAGAAGGAGATTCCTTCCGATGAAAAATTTCCAAACTCTAATCTCCACATAAATACTGGGTTACAACTCCTTACTGCTAACGCTGGGAGTGATCAATCTACGGTGGATGATGGGGTTTCATCAGATGCTGAAGATAAGCGAACCAAGACCACTGAGCTTGCACAGTTGCAAGTGGAGCTTCAACGCATGAATGCTGAGAACAAGAAGCTGAAAGAGATGCTCAACCATGTGAGCGGTAACTACACGGCCTTGCAGATGCATCTCGTGTCATTAATGCAACAGCAACAGCAACAGAACCAGCGTACAGAGAGCACAGAAAATGAGGTTGTTCAGGCAAAAGCTGAGGAGAAAAAACCCGGTGTTGGTGGAGGAAAGGTACCAAGACAATTCCTAGATATAGGTCCCAGTGGTACAGCAGAGGTAGATGAACAAGTTTCCAATTCTTCTTCCGATGAAAGAACACGATCGAGCACACCTCAGAACAATAACATTGATGTTGGAACAAGGGATTACGTGAGAAATAATAATGGTAAAAATGAGCTGGGTAGGGAAGAGAGTCCAGACTCAGAATCACAAGGGTGGGCTTCCAATAAGCTTCAGAAATTGAACCCCTCCAATCCTATGGATCAATCCACAACAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTTCGTGCACGATCAGAAGCTCCCATGATCAGCGATGGATGCCAATGGAGAAAATATGGACAAAAAATGGCTAAGGGAAATCCATGTCCTAGAGCATATTATAGATGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGAACCATTTTGGTAACAACATATGAAGGTACACATAACCATCCACTGCTACCTGCTGCTATGGCCATGGCATCGACCACAGCAGCTGCTGCTAGCATGTTACTGTCAGGTTCAATGTCCAGTGCAGATGGTATAATGAACCCCAATTTGCTAGCAAGAGCTATTCTTCCATGTTCTTCTAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCCACTGTCACATTGGACCTCACCCACAATGCAAACCCATTACAATTCCAAAGACCTCCTACCCCATTTCAAGTACCCTTTCAAGGGCAGCCTCAGAATTTTGGGTCAGGAGCCACCCCACTTGCACAAGCGCTTTACAACCAATCCAAATTCTCTGGTCTTCAATTGTCTCAGGAAGTGGGGTCTTCCCAATTTGCCCCACAACCTCCAAGACCACCGTTACATCCAAGCCAACAGCCCTCGCTTGTTGACTCAGTCAGCGCCGCCACCGCAGCCATCACCTCTGATCCAAACTTCACGGCTGTGCTCGCTGCTGCTATCTCCTCCATCATTGGTGGTACTCATGCAAACAACAACGGCCACAACAACGACAACAATAACAACAGGACTACTGTTAGCAGCTTTTCAGGAAACTAA 1779 0.4649 MDKGWCLTLDTSSSSSPFFPSKQPPTTSLNPFSNLTQDRMFPLLGFPVNLSRAANREDDHTTDDNRKVVGEVDFFSDRNKPSPPAIHDHDNINHQHVKPNITSTSVKKEIPSDEKFPNSNLHINTGLQLLTANAGSDQSTVDDGVSSDAEDKRTKTTELAQLQVELQRMNAENKKLKEMLNHVSGNYTALQMHLVSLMQQQQQQNQRTESTENEVVQAKAEEKKPGVGGGKVPRQFLDIGPSGTAEVDEQVSNSSSDERTRSSTPQNNNIDVGTRDYVRNNNGKNELGREESPDSESQGWASNKLQKLNPSNPMDQSTTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILVTTYEGTHNHPLLPAAMAMASTTAAAASMLLSGSMSSADGIMNPNLLARAILPCSSSMATLSASAPFPTVTLDLTHNANPLQFQRPPTPFQVPFQGQPQNFGSGATPLAQALYNQSKFSGLQLSQEVGSSQFAPQPPRPPLHPSQQPSLVDSVSAATAAITSDPNFTAVLAAAISSIIGGTHANNNGHNNDNNNNRTTVSSFSGN 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3698g00065 592 Coils Coil 152 186 - -
Gabi3698g00065 592 SUPERFAMILY WRKY DNA-binding domain 332 399 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 214 228 - -
Gabi3698g00065 592 SMART WRKY_cls 339 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 74 96 - -
Gabi3698g00065 592 Coils Coil 194 221 - -
Gabi3698g00065 592 Gene3D WRKY domain 324 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 10 29 - -
Gabi3698g00065 592 Pfam WRKY DNA -binding domain 341 398 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3698g00065 592 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 127 577 IPR044810 GO:0003700
Gabi3698g00065 592 FunFam probable WRKY transcription factor 31 324 401 - -
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 136 155 - -
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 512 537 - -
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 295 323 - -
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 246 281 - -
Gabi3698g00065 592 ProSiteProfiles WRKY domain profile. 334 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 570 592 - -
Gabi3698g00065 592 MobiDBLite consensus disorder prediction 200 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3698g00065 Gabi-Chr3698 607325 610035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3698g00065 1 579 WRKY Transcription Factor Family AT1G62300 52.013 4.38e-158 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3698g00065 WRKY 7.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3698g00065 - - pvu:PHAVU_006G147800g 833.943