Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3698g00053 ATGAAGGCTGAAGCTGAGAGCATTCTTAAATGGTCTTTAACTCCAACTATGTCTTCTTCTTCTTCTTCTCCCATTAGCAGTGTTATTAATAATAACCCTTCACACCCATCTCAATCAAGAGCTGTTCACCTTCGTTGTTTCGGTTCTCATCAGCTTCCAGAGAAAAGCCTGAAAACGCCAATGGTTAGGTCTTACGTTCGATCAAAAAGGCCTCGGCTTCGTTGGACACCAGATCTCCATCGTTGCTTCGTGCATGCAGTTCAAAGGCTAGGAGGAGAAGAAAGGGCAACGCCAAAAATGATTTTACAACTAATGAATGTGAAGGGGCTTACTATACTTCATGTTAAAAGCCACCTTCAGATGTACAGAAGCATGAAGCAAGAGCGGGAGAGTCAAGCAAAGAAGAATGATAAGGCACCAGTTGTAGCTTCCACATTCTCCTCAACTTTTGACTCAAGCTACGGCCAACAGAATCCTCAGCAAGTGAGCTGCGCAACTCATTATACAGAAGAGCTTGCTCGCACCCAAGCTCAATGGAATCATCATGAGCAGGAGGAGTCTTACAATAATAACAACGGAGGTGAATCGATTATGGTGTGTAACGGAGATGAACAGAAGAAGATGCACAACTACATAATCTTCGAGGATCTTCTAAGAAACCAGAGCACCCAAGAGAACAAAAGTCCTCCTAAAAAGATTTCACTAGGGCCTGCTGATTACAAAAGCGACCATAAAAGATTCGAAGATATAACTGCCATAGGAGAGAGAGCGAATGAAGACATACTGTCCCTGTCACTGAGCTCAAGAGGTTTACATCCATTCTTGAACCGGAGCGACCCTAGTCTATATGCAAATGATGTCTCTCTTGAACTCAAGCTCGCTTAA 885 0.4339 MKAEAESILKWSLTPTMSSSSSSPISSVINNNPSHPSQSRAVHLRCFGSHQLPEKSLKTPMVRSYVRSKRPRLRWTPDLHRCFVHAVQRLGGEERATPKMILQLMNVKGLTILHVKSHLQMYRSMKQERESQAKKNDKAPVVASTFSSTFDSSYGQQNPQQVSCATHYTEELARTQAQWNHHEQEESYNNNNGGESIMVCNGDEQKKMHNYIIFEDLLRNQSTQENKSPPKKISLGPADYKSDHKRFEDITAIGERANEDILSLSLSSRGLHPFLNRSDPSLYANDVSLELKLA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3698g00053 294 Gene3D - 69 127 - -
Gabi3698g00053 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 127 IPR017930 -
Gabi3698g00053 294 NCBIfam myb-like DNA-binding domain, SHAQKYF class 71 125 IPR006447 GO:0003677
Gabi3698g00053 294 FunFam Myb family transcription factor 69 127 - -
Gabi3698g00053 294 Pfam Myb-like DNA-binding domain 73 123 IPR001005 -
Gabi3698g00053 294 MobiDBLite consensus disorder prediction 15 39 - -
Gabi3698g00053 294 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 46 187 IPR046955 GO:0003700
Gabi3698g00053 294 SUPERFAMILY Homeodomain-like 68 126 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3698g00053 Gabi-Chr3698 499584 502864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3698g00053 62 132 G2-like Transcription Factor Family AT2G42660 70.423 2.46e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi3698g00053 Myb_DNA-binding 9.4e-07 CL0123