Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3698g00005 ATGACATCTGGTTATGAATACGATATTGAAGATCTGTATCAAGAAGCTCAAACGAGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTAAAGAATCATGAAAAGTACCAGTTCACCCATGAACCACCGCAACAGCCAACCAGTGGATCCCTGTTTCTGTTTAATAAAAGAGTCTTGCGCTTCTTCCGTCGAGATGGTCATAGCTGGCGGAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACACGAACGGCTTAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAAAGGCGGAGCTATTGGATGTTGGATCCGGCATATGAGCATATTGTTCTTGTGCATTACAGAGAAACAAATGAGGGAAAGCCCAGTTCTGGGCCTGGCATACAATTGTCACCAGGTTCCTCTTCTGCATTTAGTCAGAGCCCTGGGTCAACAACATCCATACTTGGTGATTCATATGAACCTAATCAGAGTTTCTCCACTGGATCTGTAGAAGTTTCCTCTGATATATTAATTGGGAACAATGGAATGGGTCACTTGGATGGAACAGATACAGAATCAGGAACCTCAACTGAACTCGAGGTTACCCATGCTTTGCGCCGATTGGAGGAGCAATTAAGTTTGAACGAGGACAGCCTTAAAGAAATTCCTCCCTTCTGCAATGAGCACGAAACTGCACATGATTCAAACCCTCAAAACAATCAAGGGGTGATCTACATGCAAGAGAAATCTGCAACTTTCCATGGACCAGATGAACATGGGCTATTTTATGATGGATATAATGGAAGACAAGGTGATAGTGGTGAATGTTATCATGAATTACTAGACCATGATTGCCCAGATGGAAATGAAGAGGCTTTATCTTGGACAAAGATGCTGGAATCATGTAAGTCCTCATCTGCGGCCAAGTTACCACAGAAAAATGCATATATGCCAGCTGGAAATGAAAACTCACCATCTTCTTCAAGAAGGGAACCAGTTGCCAACCAGGAAAACAATAACTGGCTAAACTTCAACAATGTTTTCTCACTACCTCAAGGCATTGGTGGAGTCAAATTTCGTCCATATTCTTCTATGTTGGAAACACAAGAAACTAATTCTGACTACTATGCAACATTGTTTGACCAAAGCCAAATTGGAGCACCTCTGGATGCAGATTCAAGCTTGACTGTTGCACAAAAACAGAAATTTAATATTAAGACAGTCTCCCCAGAGTGGGGTTATGCCACTGAGACTACAAAGGTAATCATTGTTGGGTCTTTCCTTTGTCATCCCTCGGATTCTGCCTGGGCATGTATGTTTGGTGATATTGAAGTTCCTGTTGAGATGATTCAGGATGGTGTAATCTGTTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCCTGCAGCGAAGTCAGAGAGTTTGAGTATCGGGATAAGACCAATAGTTGCACCCACTGTACTCCATTTGAAAAAGAAGCCTCTAGAAGTCCAGAAGAACTGTTATTACTTGTTAGGTTTGGGCAGATGCTCCTTTCCGTGTCAACTATAAACAATGACAACATAGAACCTGGAGCTACTCTCATAAAACACAAAGCTGATGATGATTCATGGAGCCATATAATAGAGGCTCTTCTAATTGGCAGTGGAACTTCATCTGGTACTATTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTGCAGTTGTGGCTTTCTTGCAGATCCCAGGAAAGAGATGAAGAGACAGGCTGTTCTTTGTCCAAGAAAGAGCAGGGTATTATTCACATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTTAGTTGTGGTGTGAATATAAATTTCCGCGACATCAATGGGTGGACTGCGCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCGTCGCTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCAATCGGCAAAACTGCTGCATCTATTGCAGCCAGCAGTGGGCATAAGGGATTGGCAGGATATCTTTCAGAGGTAGCTCTAACGAGTCATCTCTCATCTCTTACACTGGAAGAGAGTGAGCTATCTAGAAATTCTGCTGAGCTTCAAGCAGATTTAACTGTTAGTAGTGTCTCCAATGAAAACCTTGCTTCCAGTGAGGATCAGGTTTCACTCAAAGATACCTTGGCTGCTATCAGAAATGTAACTCAGGCAGCTGCACGGATACAATCTGCGTTTCGTTCACATTCATTTAGAAAACGGAGAGCGAGAGAAGCAGCTGATGGTATAAATGGGTATGGTATCAATGCAGGTAACATTGGTAACATTCCAGAGCTTTCTGCTCTGTCAAAACTTGCCTTTCATAACTCACGTGAACACAATTCAGCTGCCTTATCAATTCAGAAGAAATATCGTGGTTGGAAAGGTCGCAAAGATTTCTTAGCATTGCGCCAAAAAGTAGTGAAGATTCAGGCTCATGTGAGGGGTTACCAGGTTAGGAAGCATTACAAGGTAATATGGGCTGTTGGAATCTTGGACAAGGTTGTGCTACGATGGCGGAGAAAAGGAGTTGGTCTTCGAGGTTTCCGACAAGAGATGGAGACAATTGATGAAAATGAAGATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTAGATGTAGAAATTAAAGAGGCTGTTTCACGGGTGCTGTCCATGGTCGACTCTCCAGATGCTCAACAGCAATATCATCGCATGCTTGAGAAGTATCGTCAGGCAAAGGCTGAACGCGCGGGTACGAGTGAAGAAGCATCATTATCAACTTCTGAAATGGATTTTTTTAATATGGAAGATGATTTTTATCAATTTCCCTGGGAGCCACGCTAG 2940 0.4306 MTSGYEYDIEDLYQEAQTRWLKPAEVMYILKNHEKYQFTHEPPQQPTSGSLFLFNKRVLRFFRRDGHSWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETNEGKPSSGPGIQLSPGSSSAFSQSPGSTTSILGDSYEPNQSFSTGSVEVSSDILIGNNGMGHLDGTDTESGTSTELEVTHALRRLEEQLSLNEDSLKEIPPFCNEHETAHDSNPQNNQGVIYMQEKSATFHGPDEHGLFYDGYNGRQGDSGECYHELLDHDCPDGNEEALSWTKMLESCKSSSAAKLPQKNAYMPAGNENSPSSSRREPVANQENNNWLNFNNVFSLPQGIGGVKFRPYSSMLETQETNSDYYATLFDQSQIGAPLDADSSLTVAQKQKFNIKTVSPEWGYATETTKVIIVGSFLCHPSDSAWACMFGDIEVPVEMIQDGVICCEAPSHLPGKVTLCITSGNRESCSEVREFEYRDKTNSCTHCTPFEKEASRSPEELLLLVRFGQMLLSVSTINNDNIEPGATLIKHKADDDSWSHIIEALLIGSGTSSGTIDWLLEELLKDKLQLWLSCRSQERDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPIGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEESELSRNSAELQADLTVSSVSNENLASSEDQVSLKDTLAAIRNVTQAAARIQSAFRSHSFRKRRAREAADGINGYGINAGNIGNIPELSALSKLAFHNSREHNSAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGVGLRGFRQEMETIDENEDEDEDILKVFRKQKVDVEIKEAVSRVLSMVDSPDAQQQYHRMLEKYRQAKAERAGTSEEASLSTSEMDFFNMEDDFYQFPWEPR 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3698g00005 979 FunFam Calmodulin-binding transcription activator 2 814 862 - -
Gabi3698g00005 979 SUPERFAMILY Ankyrin repeat 607 700 IPR036770 -
Gabi3698g00005 979 Pfam IQ calmodulin-binding motif 817 835 IPR000048 GO:0005515
Gabi3698g00005 979 Pfam IQ calmodulin-binding motif 840 859 IPR000048 GO:0005515
Gabi3698g00005 979 Gene3D - 500 704 IPR036770 -
Gabi3698g00005 979 FunFam Calmodulin-binding transcription activator 2 404 498 - -
Gabi3698g00005 979 SMART CG_1_2 12 130 IPR005559 GO:0003677
Gabi3698g00005 979 SMART iq_5 814 836 IPR000048 GO:0005515
Gabi3698g00005 979 SMART iq_5 756 778 IPR000048 GO:0005515
Gabi3698g00005 979 SMART iq_5 837 859 IPR000048 GO:0005515
Gabi3698g00005 979 MobiDBLite consensus disorder prediction 134 173 - -
Gabi3698g00005 979 Pfam Ankyrin repeats (3 copies) 621 699 IPR002110 GO:0005515
Gabi3698g00005 979 ProSiteProfiles Ankyrin repeat region circular profile. 639 665 - -
Gabi3698g00005 979 SMART ANK_2a 639 668 IPR002110 GO:0005515
Gabi3698g00005 979 SMART ANK_2a 678 707 IPR002110 GO:0005515
Gabi3698g00005 979 FunFam Calmodulin-binding transcription activator 4 isoform A 521 704 - -
Gabi3698g00005 979 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Gabi3698g00005 979 Gene3D - 814 863 - -
Gabi3698g00005 979 Gene3D Immunoglobulins 404 499 IPR013783 -
Gabi3698g00005 979 ProSiteProfiles IQ motif profile. 758 783 IPR000048 GO:0005515
Gabi3698g00005 979 Pfam IPT/TIG domain 411 493 IPR002909 -
Gabi3698g00005 979 SUPERFAMILY E set domains 410 494 IPR014756 -
Gabi3698g00005 979 ProSiteProfiles Ankyrin repeat profile. 639 671 IPR002110 GO:0005515
Gabi3698g00005 979 MobiDBLite consensus disorder prediction 316 340 - -
Gabi3698g00005 979 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 947 - -
Gabi3698g00005 979 ProSiteProfiles IQ motif profile. 838 863 IPR000048 GO:0005515
Gabi3698g00005 979 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Gabi3698g00005 979 MobiDBLite consensus disorder prediction 129 173 - -
Gabi3698g00005 979 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 804 861 IPR027417 -
Gabi3698g00005 979 ProSiteProfiles IQ motif profile. 815 844 IPR000048 GO:0005515
Gabi3698g00005 979 CDD IPT 411 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3698g00005 Gabi-Chr3698 53098 63132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3698g00005 3 972 CAMTA Transcription Factor Family AT1G67310 52.606 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gabi3698g00005 CG-1 2.5e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3698g00005 K21596 - gmx:100786880 1542.32