Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3692g00031 ATGATGATGGAACTACCGGATATTTGGATAATAAGATTGGTTGTGGCATATGCTCTCTGTCTTTGTATATTTATCAGATCAGCTTCTGCAACTGAAGGGTTCGAGAGCATAGCATGCTGTGCTGATTCAAATTACACAGATCCACTGACCACCTTAAATTACACAACAGATTACAGCTGGTTCTCTGATAAAAGTAGTTGCAGATCAATATCTGAAATTGGGTTAAACCACAGTAGCAATGAAAATTTTCGACTGTTCAATATTGTTAAGGGAAAGAGATGTTACAATTTGCCAACAATTGAGAATAAAATATATCTGATAAGAGGCACATTTCCATTTGACAGTTTAAATTCTTCCTTTGATGTTTCAATTGGGGTGACACCATTAGGTGCAGTGAGATCGTCCAGCCTTCAGGACTTGGAAATTGAGGGAGTTTTCAGAGCCACCAAAAACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTTAATCCATTTATTTCTTTGCTTGAATTAAGGCCATTGCAGGAAGAGTACCTAGATGGTTTGCCTAATAGTGTTTTAAAACTGATAAGCAGAAATAATCTTGGGGGAACGAAAGATGATGATATCAGGTACCCAGTTGACCAAAGTGATAGAATCTGGAAAGCAACTTCAAGTTCATCATCTGCTCTTCCATTGTCTTTCAATGTCAGCAATTTTGACCTCAAAACTAATGTGACACCTCCTCTACAAGTACTACAGACAGCTCTTACCCACCCTGAGCGATTGGAGTTCATCCACAATGACCTTAAGACTGGGGATTATGTATACCGTGTGTTTCTCTATTTCCTTGAATTAAATAGCAATGTCAAAGCAACCCAAAGGGTGTTTGACATCTATGTTAATAGTGAGATTAAAGAGGAGAGATTTGATATATTGGCTGGAGGTTCCAACTATAGATACACTGCCTTGAACGTTTCAGCAAATGGATCACTTAATGTAACCTTGGTCAATGCATCTGGGTCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGGTAAGGTCATGGATTGAAGAAACCAACCAAACAGAAGTGGAAGTCGTTCAGAAGATGAAAGAAGAGTTGTTGTTACAAAACCAAGACAATAAAGCGTTGGAGAGTTGGGCTGGAGACCCTTGTATTCTTTTCCCCTGGCAAGGAATAGCATGTGATCGTTCAAATGGTTCACCTGTTATCACTAATCTAGATCTTTCCTCTAGTAATCTCAAAGGACCAATCCCTTCCAGTGTCACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAACAGCTTCATGGGTTATATCCCCTCTTTTCCTCCTTCCTCCTTGTTGATATCAGTAGATCTGAGCTACAATGATCTTATGGGACCGCTTCCAGAATCGATTATCTCACTGCCTCATTTGAAATCATTATATTTTGGCTGCAACCAAAAAATGAGCTACGAGGATCCAGCAACGTTGAACAGTACACTAATCTATACAGATTACGGAAGATGCAAATCAAAAGAACCCAGATTTGGACAAGTAATTGTTATTGGTGCTGCTACATGTGGATCACTTTTGATTACTTTGGCTGTTGGAATTCTTTTTATTTGCCGCTATAGACAAAAATTAATTCCATGGGAGGGATTTGGTGCAAAGAACTACCCAATGGCAACAAATTTAATTTTCTCTTTGGCAAGCAAAGATGATTTCTTCATAAAATCCGTTTCAATTCAACCATTCACTTTGGAAAATATAGAGGTGGCCACACAGAGGTACAAAACTTTGATAGGTGAAGGAGGGTTTGGTTCTGTTTACCGGGGCACTCTAAATGATGGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACATCAACTCAGGGAACTCGAGAATTTGATAATGAGCTGAACCTACTTTCTGCAATACAGCATGAGAACCTGGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTCGTGTATCCTTTCATGTCCAACGGTTCTTTGCAAGATAGACTATATGGGGAGCCAGCAAAGAGAAAGGTATTAGACTGGCCAACTAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCTGGACGTTCCGTAATACACAGGGACGTAAAATCAAGCAATATCCTTCTGGATCATAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTTATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTATCTGGATCCTGAATACTACAAAACCCAGCAATTATCTGAAAAAAGTGATGTCTACAGCTTTGGGGTGGTTCTACTTGAAATTGTCAGTGGTCGGGAACCTCTCAACATTAAGAGACCACGGAGTGAGTGGAGCTTGGTTGAATGGGCTACACCATATATAAGAGCGTCAAAGATGGATGAAATTGTGGATCCTGGCGTAAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCCTTCTCAACATTTAGACCAAGCATGCTTGACATTATCCGTGAGTTGGAAGATGCTCTCATTATAGAAAACAATGCATCCGAATACATGAAGTCCATAGACAGCCTTGGAGGATCCAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTACCCTCAACTTCAACTACAGCAGAATCAACCATCACATCCCAAACCTTGTCCCACCCACAGCCGAGATAG 2778 0.4093 MMMELPDIWIIRLVVAYALCLCIFIRSASATEGFESIACCADSNYTDPLTTLNYTTDYSWFSDKSSCRSISEIGLNHSSNENFRLFNIVKGKRCYNLPTIENKIYLIRGTFPFDSLNSSFDVSIGVTPLGAVRSSSLQDLEIEGVFRATKNYIDFCLVKGEVNPFISLLELRPLQEEYLDGLPNSVLKLISRNNLGGTKDDDIRYPVDQSDRIWKATSSSSSALPLSFNVSNFDLKTNVTPPLQVLQTALTHPERLEFIHNDLKTGDYVYRVFLYFLELNSNVKATQRVFDIYVNSEIKEERFDILAGGSNYRYTALNVSANGSLNVTLVNASGSEFGPLLNAYEILQVRSWIEETNQTEVEVVQKMKEELLLQNQDNKALESWAGDPCILFPWQGIACDRSNGSPVITNLDLSSSNLKGPIPSSVTEMTNLKILNLSHNSFMGYIPSFPPSSLLISVDLSYNDLMGPLPESIISLPHLKSLYFGCNQKMSYEDPATLNSTLIYTDYGRCKSKEPRFGQVIVIGAATCGSLLITLAVGILFICRYRQKLIPWEGFGAKNYPMATNLIFSLASKDDFFIKSVSIQPFTLENIEVATQRYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVYSFGVVLLEIVSGREPLNIKRPRSEWSLVEWATPYIRASKMDEIVDPGVKGGYHAEAMWRVVEVALQCLEPFSTFRPSMLDIIRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSTTAESTITSQTLSHPQPR 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3692g00031 925 Gene3D Ribonuclease Inhibitor 356 513 IPR032675 -
Gabi3692g00031 925 SMART serkin_6 596 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3692g00031 925 CDD STKc_IRAK 602 869 - -
Gabi3692g00031 925 FunFam Leucine-rich repeat receptor-like kinase 359 492 - -
Gabi3692g00031 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Gabi3692g00031 925 Gene3D - 188 350 - -
Gabi3692g00031 925 PANTHER OS07G0107800 PROTEIN-RELATED 36 872 - -
Gabi3692g00031 925 ProSiteProfiles Protein kinase domain profile. 596 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3692g00031 925 SUPERFAMILY Protein kinase-like (PK-like) 577 868 IPR011009 -
Gabi3692g00031 925 Gene3D Transferase(Phosphotransferase) domain 1 672 885 - -
Gabi3692g00031 925 FunFam Nodulation receptor kinase 562 671 - -
Gabi3692g00031 925 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 672 888 - -
Gabi3692g00031 925 Pfam Malectin-like domain 41 349 IPR024788 -
Gabi3692g00031 925 SUPERFAMILY L domain-like 380 491 - -
Gabi3692g00031 925 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Gabi3692g00031 925 Pfam Protein tyrosine and serine/threonine kinase 600 868 IPR001245 GO:0004672|GO:0006468
Gabi3692g00031 925 Gene3D Phosphorylase Kinase; domain 1 568 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3692g00031 Gabi-Chr3692 457705 464193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3692g00031 13 875 Receptor kinase-like Gene Family AT1G67720 34.035 4.85e-135 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gabi3692g00031 Malectin_like 8.9e-48 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3692g00031 - - gmx:100781986 1534.24