Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3692g00030 ATGACTCAAGCCAATGGCTATCGTCATGAAACAGTGATTGACATAAAGAAACCCGTGAGTTTCACTGGGGGGCTTCAGTTTGAAAGCCTCACATACACTGTGACAAAGCAGAAGAAGGTTGATGGGAATTGGTCCAAGGAAGAGGTGGACTTGCTGCATGATATCACTGGTTATGCACCCAAAGGTTGCATCACTGCAGTGATGGGTCCTAGTGGTGCAGGAAAGTCCACTTTTTTGGATGGTCTTGCTGGGAGAATTGTTAGTGGGAGCCTTAAAGGGAAGGTCTCCTTGGATGGGAGAACTGTTAGTCCAAGCTTGATCAAAAGAACTTCTGCATATATTATGCAGGATGATAGACTTTTTCCAATGCTTACTGTCTATGAGACTTTGATGTTTGCTGCTGATTTTCGCTTGGGGCCACTTTCACTTGCTGACAAGCAGCAGAGGGTAGAGAAGCTGATTGAGCAGCTTGGCTTATCTTCAGCAAGGAACACCTATATAGGAGATGAAGGGACAAGAGGAGTGTCAGGTGGAGAGCGTCGCAGGGTGTCAATTGGGGTGGACATCATTCATGGACCATCACTTTTGTTTCTGGATGAGCCAACTTCAGGTCTAGACTCCACCAGTGCTCACAGCGTGATTGAAAAGGTGAATGACATTGCACGCAATGGAAGCACCGTGATTCTCACAATCCACCAGCCTTCATCAAGAATCCAGTTGCTCCTTGATCATCTCATCATCCTCGCTAGAGGCCAGCTCATGTTTCAAGGCTCACCTAAAGATGTAGCTCTTCATTTGGGTCGCATGGGACGCAAAGTCCCCAAAGGAGAGAACCCAATTGAGTATCTCATGGACGTGATTCAAGAGTATAATCAATCTGAACTTGGAGTTGAGGCACTAGCTGAGTTTTCACGCACAGGGATGAAACCCCCTCCTTTGTCTCACCAGGAAGAACTGTCACGGTCACTGTCTTCTGTTGCACCCTCACCATTCCCATCTTCATTCCAAGGAGCTAGATATGATGACAAATCTCAAGACCTCTCTATCTCATCACAAGTAAGTAGGCGTATCATAAATGATTTTGATCACAGTGTTAGAAGCCCACAAAACACATCAAAGTCATGGAGTGCCACTAATAGTGCGGCCTTTTTAAAATTCACACCTTCACGGCTTAAGAATGATCAGAAGGTGCAGAATCCCGTAAGCAGCAATGCTTCCCCGGGATACTACACATACTCGAGTGAAATCCTCCCAGCCACTCCAACACCTCACAGTAGTGACTACACAGTGAATGAGAATGACTACCTCACTCCCCAAGGTGACACACCAGAACATCTTGGTCCAAAGTTTGCAAATTCTTACATAGGAGAGACTTGGATCCTTATGCGCCGTAATTTCATAAACATAAGGAGAACCCCTGAGCTTTTTCTATCAAGACTTATGGTTCTTACCATTATGGGCTTCATGATGGCCACCATGTTCCACAACCCCAAAGAAACCTTGCAAGGAATCACAAACCGTCTCAGTTTCTTTATCTTCACCGTGTGCCTTTTCTTCTTCTCTTCCAATGATGCCGTCCCTGCCTTCATCCAAGAGAGGTTCATCTTCCTCCGAGAGACTTCCCACAATGCTTATAGAGCTTCCTCCTACACCATTGCTGGTCTAATCACTCACATGCCGTTTCTTGCACTGCAAGCTACAGCATATGCAGCCATTGTTTGGTTTGCTCTGCAGCTTCGAGGCCCTTTCCTCTACTTTTGGCTTATTCTCTTCGTTTCTCTTCTGTCAACCAATTCATTTGTTGTGTTTGTGAGCTCAGTGGTTCCAAATTACATCTTGGGTTATGCTGCGGTGATTGCCTTCACTGCCCTGTTCTTCTTGTTCTGTGGATACTTCTTGAGCAGCCATGACATTCCCATTTATTGGCGTTGGATGAACAAAATTTCAACAATGACATACCCTTATGAGGCGCTCTTGATGAACCAGTTCCAGACCGATATTGTGTTTGGAGAAAATGATGGTATACCTGTTACCGGTTTTGATATCTTGAATAGTCTTCATATTGGGGTTCACGAGCGTGAGAAGAGGATCAATGTGCTTATGATGTTAGGTTGGGCTGTGCTATATAGGATTTTATTTTACTTAGTCCTTCGTTTTGGACCAAAAAACCAGAGGTCGTAG 2181 0.4507 MTQANGYRHETVIDIKKPVSFTGGLQFESLTYTVTKQKKVDGNWSKEEVDLLHDITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIVSGSLKGKVSLDGRTVSPSLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKQQRVEKLIEQLGLSSARNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVNDIARNGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKDVALHLGRMGRKVPKGENPIEYLMDVIQEYNQSELGVEALAEFSRTGMKPPPLSHQEELSRSLSSVAPSPFPSSFQGARYDDKSQDLSISSQVSRRIINDFDHSVRSPQNTSKSWSATNSAAFLKFTPSRLKNDQKVQNPVSSNASPGYYTYSSEILPATPTPHSSDYTVNENDYLTPQGDTPEHLGPKFANSYIGETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATMFHNPKETLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFLRETSHNAYRASSYTIAGLITHMPFLALQATAYAAIVWFALQLRGPFLYFWLILFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPIYWRWMNKISTMTYPYEALLMNQFQTDIVFGENDGIPVTGFDILNSLHIGVHEREKRINVLMMLGWAVLYRILFYLVLRFGPKNQRS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3692g00030 726 Pfam ABC-2 type transporter 458 663 IPR013525 GO:0016020|GO:0140359
Gabi3692g00030 726 MobiDBLite consensus disorder prediction 306 346 - -
Gabi3692g00030 726 CDD ABCG_EPDR 25 257 - -
Gabi3692g00030 726 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 713 - -
Gabi3692g00030 726 MobiDBLite consensus disorder prediction 422 442 - -
Gabi3692g00030 726 MobiDBLite consensus disorder prediction 317 346 - -
Gabi3692g00030 726 FunFam ABC transporter G family member 6 35 273 - -
Gabi3692g00030 726 SMART AAA_5 61 259 IPR003593 GO:0016887
Gabi3692g00030 726 Pfam ABC-2 type transporter 232 292 IPR043926 GO:0140359
Gabi3692g00030 726 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Gabi3692g00030 726 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 275 IPR003439 GO:0005524
Gabi3692g00030 726 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524|GO:0016887
Gabi3692g00030 726 Gene3D - 26 269 IPR027417 -
Gabi3692g00030 726 MobiDBLite consensus disorder prediction 422 438 - -
Gabi3692g00030 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 265 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3692g00030 Gabi-Chr3692 449629 452722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3692g00030 24 289 Calmodulin-binding Proteins AT2G36910 26.296 7.18e-12 67.4