Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3691g00001 ATGACCATTCTTAGTGCTCTGCTTGTTATTTCCAACCTACTATTTTTCTTCTTTCATATTTCCTATGCAGTTGATACCATTACCCAGTTCAAGTCACTTCCTGATGATGGCAGCACCTTGGTTTCTAAGGATGGAACCTTTGAGTTGGGGTTCTTCAATCCTGGTAGATCCTCAAACCGCTATGTTGGAATATGGTACAAAAATATCCCATATACATCTGTTGTTTGGGTTGCCAACCGTGATAACCCCATCAGTTACAACTCCAGCAGCAGGTTGATCATAAGCAAAGAGGGAAACCTTGTGCTTCTAAGCCAGAATCAGACTCTTCTTTGGTCAACATACTCTACAAAAAAGGCTTCACATCCCATTGTGCAACTCTTGGATACTGGAAATTTGGTACTTGTAGATGAGAAGGGCAACAACAATGAAACAAGTTTTTTATGGCAGAGCTTCGAGCATCCTTGTGATAAATTGTTACCAGGACAGAAGATTGGATGGGACCTAAAAACCGGTCTTGATCGGCGCCTTACTGCTTGGAAAAATTCGGATGACCCCTCTTCAGGAAACGAGACTTTATCTATTGTCAATCCTAGCAACCCGGAAATGGTAATATGGAGTGGCTCGGATATGTTGTACAGGAGTGGCCCCTGGAATGGCTTTGGTTTCAGTGAAACAGTAGGATTGAATTCTGATCCTCTTTTCGTTCACAAATTTGTGAACAATGAACATGAAGCGTATTACACATACACCCTCAAGAATAGTTCTGTGCTTTCTGTGATTGTTTTGAACCTTAATGGTCGTCAACGCCTAATATGGTCTCCGGAGCGCAGAAGTTGGATTCTTTACCAAACCTGGCCACAAGACCAATGTGATGCATATAATTTTTGTGGCGCATATAGACAATGTATGGTTGATATAAATTCAGAGTGCGAATGTTTAGAAGGATTCATGCTGAACTCATCCCAAAGCCATAATCCAGGACAGGGATGTGTGCGCAGTGAACAGTGGATCTGCGGGGTCAAAAATAGAGATGGTTTTCGAAGATTTACAGGGATCAAATTGCCAGATACTACAAATTCTTGGGTTAATGAAAGTATGACACTAGAAGATTGCAAGGCCAAATGCTTGGAAAACTGTTCCTGCACAGCTTATGCAAACACTGACGTAAGGGGTGTTGGTAGTGGTTGTTCCATCTGGTTTGGTGATCTTCTTAATTTGAGAGTTTCACAAGGTGGGCCAGATCTATATGTTCGAATGGCCGTTTCAGATATAGACGCGAAACATGGGCGTTACAAAAAGACAGTCTTGGTGGTTACCATCACAGTTTCATTGGTCCTTGTGATGCTATTATCTTTCTCCTACATTTACGTTACCAAAACAAAGCATAAAGAAGAGAAAGATGAAGGCGAACAAGAAGATTTGGAGCTTCCTTTATTTAATCTTGCCACGATAGTTCACGCTACCAATAACTTCTCAACTGACAACAAGCTCGGGCAAGGTGGTTTTGGGCCAGTATACAAGGGGACATTGCTGGACGGACAAGAAATTGCAGTCAAAAGGCTCTCAAGGAGTTCTGGACAAGGATTGAAAGAATTTAAGAATGAAGTTATATTGTGTGCCAAACTTCAGCACCGAAATCTTGTTAAGGTTCTTGGTTTTTGCATTGATGGAGAGGAGAAAATGCTACTCTATGAATACATGCCCAATAAAAGCCTCGATTCATTTCTATTTGATTCAGTTCAATGTAAGCTTTTAGATTGGACTAAGCGCTTGAACATCTTGTGTTCAATTGCTCGGGGGCTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTAAAAGCAAGTAATATTTTATTAGACAAAGATATGAATCCAAAAATTTCAGATTTTGGCATGGCCAGAATGTGTGGAGGTGATCAAATCGAAGGGAATACAAACACAATAGTTGGGACATACGGTTATATGGCACCTGAATATGCCAATGGTGGACTATTCTCCATAAAATCTGATGTATTCAGCTTTGGAGTATTATTGCTAGAAATTGTAAGCGGAAAGAAAAGCAGAGCACTCGCCTACTATGACCACGATTATAATCTTATTGGGCACGCATGGAGATTATGGAAGGAGGGCATTCCAGAACAATTGATTGATGCTTGTTTGGGAGATTCATGTATTTTATCTGAAGCTTTACGCTGCATTCAAATCGGTCTTTTATGTATGCAGCATCATCCTGACGATAGGCCAAACATGACATCTGTGGTTGTGATGCTGAGCAGCGAAATTGCTTTAGCTCAACCAAAGGAACCTGGTTTCTTAATTAGAAAGCCCTCAATTAAAGGAGATCATTCTCCAAGAAGACAAGTGTCTTCTTCACTCAATGAAGTAACTATCTCAGTATTAAATGCAAGATAG 2427 0.4046 MTILSALLVISNLLFFFFHISYAVDTITQFKSLPDDGSTLVSKDGTFELGFFNPGRSSNRYVGIWYKNIPYTSVVWVANRDNPISYNSSSRLIISKEGNLVLLSQNQTLLWSTYSTKKASHPIVQLLDTGNLVLVDEKGNNNETSFLWQSFEHPCDKLLPGQKIGWDLKTGLDRRLTAWKNSDDPSSGNETLSIVNPSNPEMVIWSGSDMLYRSGPWNGFGFSETVGLNSDPLFVHKFVNNEHEAYYTYTLKNSSVLSVIVLNLNGRQRLIWSPERRSWILYQTWPQDQCDAYNFCGAYRQCMVDINSECECLEGFMLNSSQSHNPGQGCVRSEQWICGVKNRDGFRRFTGIKLPDTTNSWVNESMTLEDCKAKCLENCSCTAYANTDVRGVGSGCSIWFGDLLNLRVSQGGPDLYVRMAVSDIDAKHGRYKKTVLVVTITVSLVLVMLLSFSYIYVTKTKHKEEKDEGEQEDLELPLFNLATIVHATNNFSTDNKLGQGGFGPVYKGTLLDGQEIAVKRLSRSSGQGLKEFKNEVILCAKLQHRNLVKVLGFCIDGEEKMLLYEYMPNKSLDSFLFDSVQCKLLDWTKRLNILCSIARGLLYLHQDSRLRIIHRDLKASNILLDKDMNPKISDFGMARMCGGDQIEGNTNTIVGTYGYMAPEYANGGLFSIKSDVFSFGVLLLEIVSGKKSRALAYYDHDYNLIGHAWRLWKEGIPEQLIDACLGDSCILSEALRCIQIGLLCMQHHPDDRPNMTSVVVMLSSEIALAQPKEPGFLIRKPSIKGDHSPRRQVSSSLNEVTISVLNAR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3691g00001 808 Pfam Protein tyrosine and serine/threonine kinase 493 760 IPR001245 GO:0004672|GO:0006468
Gabi3691g00001 808 ProSiteProfiles Protein kinase domain profile. 491 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3691g00001 808 SUPERFAMILY Protein kinase-like (PK-like) 474 772 IPR011009 -
Gabi3691g00001 808 Gene3D - 19 151 IPR036426 -
Gabi3691g00001 808 Gene3D Hepatocyte Growth Factor 338 416 - -
Gabi3691g00001 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Gabi3691g00001 808 CDD B_lectin 36 154 IPR001480 -
Gabi3691g00001 808 Gene3D Transferase(Phosphotransferase) domain 1 567 772 - -
Gabi3691g00001 808 Gene3D Phosphorylase Kinase; domain 1 452 566 - -
Gabi3691g00001 808 Pfam S-locus glycoprotein domain 212 318 IPR000858 GO:0048544
Gabi3691g00001 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Gabi3691g00001 808 SMART serkin_6 491 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3691g00001 808 Pfam D-mannose binding lectin 74 180 IPR001480 -
Gabi3691g00001 808 SMART ntp_6 341 419 IPR003609 -
Gabi3691g00001 808 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 753 - -
Gabi3691g00001 808 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Gabi3691g00001 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 770 - -
Gabi3691g00001 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 456 566 - -
Gabi3691g00001 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Gabi3691g00001 808 Pfam PAN-like domain 338 405 IPR003609 -
Gabi3691g00001 808 CDD STKc_IRAK 497 762 - -
Gabi3691g00001 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 151 - -
Gabi3691g00001 808 CDD PAN_AP_plant 341 420 - -
Gabi3691g00001 808 Pfam Domain of unknown function (DUF3403) 763 808 IPR021820 GO:0004674
Gabi3691g00001 808 ProSiteProfiles PAN/Apple domain profile. 338 420 IPR003609 -
Gabi3691g00001 808 SMART blect_4 31 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3691g00001 Gabi-Chr3691 1923 5109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3691g00001 435 779 Receptor kinase-like Gene Family AT4G23230 55.241 3.95e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi3691g00001 PK_Tyr_Ser-Thr 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3691g00001 - - gmx:100790436 1119.38