Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi368g00008 ATGGTTAGGAAGTGCTCACATTGTGGAAACATAGGTCATAATTCGAGGACCTGCACATCTTTAAGAGGGAATTTTGTAGGTGTTCGTCTCTTCGGTGTTCAACTAGACTTATCCTCCTCTTGTGTTACCATGAAGAAAAGCTTTAGCATGGATTCCTTTCCCTCATCATCATCATCTCCATCTTCATCCTTTTCTTCTTCAAGGATAACCATTGATGAGAACTCTGACAGAACCTCTATTGGGTATCTATCAGATGGTCTCATAGTTCGAGCACAAGAGAGGAAGAAAGGAGTTCCATGGACAGAAGAAGAGCACCGAATATTCCTTGTTGGACTTGAGAAGCTGGGAAAAGGTGATTGGAGAGGTATCTCTAGAAACTATGTGACTACAAGAACACCAACACAAGTCGCTAGCCATGCTCAAAAGTACTTTATTCGACTGGCAACGATTAATAAGAAGAAGAGACGTTCTAGTCTCTTTGACTTGATTGGTAGGGGAAGCACAAGCACAGAAGCTCGTCCAATTAGCAATTACAACTGCAAATCAGGCGATTCAGTTTCTACTCATCAACATGTTATTAAATCCAAATGTGAAGTTGAGAACAATGCCACTTTGTCACTGCTAGGGAGCCTTACCTCATTTCAACAAGAAACCAAATCAAATGAGCATAAAACTACTGATAATTACTGTCAAATTCAACCAGCAGCTGCAGCACAAGATGAAGCTATTATGCCCCTCTGGCTTCATCCCCAGATGATGAAATCTTCAAATGTACCCAATTCCTCAAATATTAATGCAGTAGTGCCTGATCTGGAACTCACTCTTGCAGTCCCCAAGGCTAAGAGTACCCTAGAACAAAATAAATCACCACGGGGTTCCTTCCTTCTCGGGCCAATTAGCGTGACTTAA 909 0.4169 MVRKCSHCGNIGHNSRTCTSLRGNFVGVRLFGVQLDLSSSCVTMKKSFSMDSFPSSSSSPSSSFSSSRITIDENSDRTSIGYLSDGLIVRAQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRLATINKKKRRSSLFDLIGRGSTSTEARPISNYNCKSGDSVSTHQHVIKSKCEVENNATLSLLGSLTSFQQETKSNEHKTTDNYCQIQPAAAAQDEAIMPLWLHPQMMKSSNVPNSSNINAVVPDLELTLAVPKAKSTLEQNKSPRGSFLLGPISVT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi368g00008 302 Gene3D - 98 151 - -
Gabi368g00008 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Gabi368g00008 302 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 146 IPR006447 GO:0003677
Gabi368g00008 302 CDD SANT 99 144 IPR001005 -
Gabi368g00008 302 SMART sant 96 146 IPR001005 -
Gabi368g00008 302 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Gabi368g00008 302 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Gabi368g00008 302 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Gabi368g00008 302 PANTHER TRANSCRIPTION FACTOR KUA1 3 253 - -
Gabi368g00008 302 SUPERFAMILY Homeodomain-like 93 148 IPR009057 -
Gabi368g00008 302 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Gabi368g00008 302 FunFam transcription factor MYB1R1 98 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi368g00008 Gabi-Chr368 36385 37705 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi368g00008 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi368g00008 - - qsa:O6P43_003909 317.39