Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi368g00001 ATGAGTAGCCGAAAGGGTTCTTCTGACATCACTGGCAAAGTGGTGGTGGTTGCAGTTAAAGCTTCAAAAGAGATTTCAAGGACTGCTTTGGTGTGGGCTTTGAATCATGTTGCTCAACCAGGGGACTGCATTAAGATGTTGGTCGTTATTCCGGCTATCTGCTCAAACACGAAGATATGGGGACTTCCGAAACTGGCTGCTGATTGTATCACTAGTCACTGGATATCTCGTTTAGGAACTGTTTCAGATCAGAGAGAAGTTAGTGTTAATTCATGTTCTCAAATGGTTCTTCAACTTCATGATTTTTATGATCCAGAGAAGATAAAGATCAGAGTAAAGATTCTTTCTAGTTCCGTATGTGGAGCAGTGGCTGCTGAAGCCAAGAGAGTTCAATCAAGCTGGGTTATATTAGACAAAAAATTGAAAAATGAGAAGAAATACTGCATGGAGGAGCTAAGTTGCAATGTTGTAATCATGAAGCGATCTGGGCCAAATGTTCTACGATTGAATTTGACCAGTTCACCAAATATGGAACTTAAAGGGGGTTGTCCATTGTCATCGAAGCTGAATGCTTTTCCAAGAAACTTCAAAGACAAGTCTGAACATCCAGATATGATTAGAGGTCCTATTGTTACTTCTGCCAGTAGTTCAAAACTCGGGTCAAACCTGACTTCAACTAACGTTGGAACATCATCAACATTAAATGATTCAGAGAGTGAAGATTTGAGTTTATCATCCAGAAGTTCATATTTCCAGCCATGGATTTCAAATGCAATTTGCATTGATGGTGACATTTCAAAAGAGGACATTATGCTAAGATCCAGTGATGAGGCTTTGGTTTCTATAAACAAAGCATTGCATCAGAAATTCTCAAAGTTGGATCAAGATCCTAATTTAGGAGTACTTAGGTGTAAACTTGATGTGAACTTAAGTAGAAGTGTTAGAGAAGCAATTTCACAAGCCAGAAGTGCCCCTCATGGAACTCCCCCATTGTGCTCTATTTGTCAGCATAGTTCACCTGTATTTGGTAATCCTCCAAGATGGTTTACATTTGCTGAACTGCAACATGCCACATGTGGATTTTCACAAGCAAATTTTTTGGCTGAAGGTGGGTTTGGTTCTGTACACCGTGGTGTCCTACGTAATGGGCAGGTCATTGCTGTCAAGCAGTATAAAGTAGCTAGTACTCAAGGTGATAAAGATTTTTGCTCTGAAGTTGAGGTGTTAAGCTGTGCACAACATCGTAATGTTGTGATGCTCATTGGGTTTTGTGTGGAGAATGGAAGAAGACTGCTAGTTTATGAATACATCTGCAACGGATCCCTATATTCTCATCTTCATGGACAAAAGCAGAATGTACTAGAATGGTCTGCACGTAAAAAAATTGCAGTTGGAACAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGAGGCCTAACAATATTCTCCTCACTCATGACTTTGAAGCATTAGTTGGAGATTTTGGACTTGCCAGGTGGCAGCCGGATGGAGAAATGGGTGTACAATCCAGGGTGATAGGAACATTAGGGTATTTGGCTCCAGAATATACTCTAAGTGGGGAAATCACTGAAAAAGCTGATGTGTATTCCTTTGGGGTAGTATTACTGGAGCTTATTACTGGAAGGAAAGCTATGGATGTAAACAGGCCCAAAGGTCAGCAATGCCTCCATGAGTGGGCACGTCCATTGCTTGAGGTACATGCCATTGATGAACTGGTTGATCCAAGCATAAGAAACTGCGCTATTGATAAAGAGGTTCACCGCATGCTGCAATGTTCCTCATTGTGCATCCAGCAGGATCCTCATTCAAGGCCACGAATGTCTCAGGTGCTCCGGATGCTGGAAGGTTAA 1902 0.4154 MSSRKGSSDITGKVVVVAVKASKEISRTALVWALNHVAQPGDCIKMLVVIPAICSNTKIWGLPKLAADCITSHWISRLGTVSDQREVSVNSCSQMVLQLHDFYDPEKIKIRVKILSSSVCGAVAAEAKRVQSSWVILDKKLKNEKKYCMEELSCNVVIMKRSGPNVLRLNLTSSPNMELKGGCPLSSKLNAFPRNFKDKSEHPDMIRGPIVTSASSSKLGSNLTSTNVGTSSTLNDSESEDLSLSSRSSYFQPWISNAICIDGDISKEDIMLRSSDEALVSINKALHQKFSKLDQDPNLGVLRCKLDVNLSRSVREAISQARSAPHGTPPLCSICQHSSPVFGNPPRWFTFAELQHATCGFSQANFLAEGGFGSVHRGVLRNGQVIAVKQYKVASTQGDKDFCSEVEVLSCAQHRNVVMLIGFCVENGRRLLVYEYICNGSLYSHLHGQKQNVLEWSARKKIAVGTARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGEMGVQSRVIGTLGYLAPEYTLSGEITEKADVYSFGVVLLELITGRKAMDVNRPKGQQCLHEWARPLLEVHAIDELVDPSIRNCAIDKEVHRMLQCSSLCIQQDPHSRPRMSQVLRMLEG 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi368g00001 633 PANTHER OS01G0750732 PROTEIN 270 633 - -
Gabi368g00001 633 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 333 436 - -
Gabi368g00001 633 CDD STKc_IRAK 367 633 - -
Gabi368g00001 633 MobiDBLite consensus disorder prediction 216 240 - -
Gabi368g00001 633 SUPERFAMILY Protein kinase-like (PK-like) 339 631 IPR011009 -
Gabi368g00001 633 Gene3D Transferase(Phosphotransferase) domain 1 437 633 - -
Gabi368g00001 633 Pfam Protein tyrosine and serine/threonine kinase 365 631 IPR001245 GO:0004672|GO:0006468
Gabi368g00001 633 Gene3D Phosphorylase Kinase; domain 1 333 436 - -
Gabi368g00001 633 ProSitePatterns Tyrosine protein kinases specific active-site signature. 482 494 IPR008266 GO:0004672|GO:0006468
Gabi368g00001 633 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 437 633 - -
Gabi368g00001 633 ProSiteProfiles Protein kinase domain profile. 361 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi368g00001 Gabi-Chr368 6362 12779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi368g00001 323 627 Trihelix Transcription Factor Family AT1G68690 49.838 3.91e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gabi368g00001 PK_Tyr_Ser-Thr 3.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi368g00001 - - aprc:113855006 974.926