Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3681g00022 ATGGAGTTTGACCTTGAAAACCCTTTAGAAAACTTCCACGACTTTCATTGTGATGCTGTCTCTTCCCTCTTCCTCATTGAATCTGACCACATCCCTTCTCAAAATTACTTTCTGACTCTCAAAGCCAGAGATATTGACATCTTTGTTAGAAGAGAAGTCATTTCCTTAATCTCACAGTTGTCCTGCACTTTGGATCCAGTTTTGTCTTACCTTGCTATCAACTATCTTGACCGGTTCATGGCAAACCAAGGGATATTGCAACCGAAGCCATGGGCTCTCAGGCTTCTTGCAATCTCTTGCTTTTCTCTAGCTGCCAAGATGATGAGAACAGAGTTCTCTGCCACTGATATTCAGGCTCTTTTGAAACAAAGTGATGGTGGCATCATATTTGAGACACAATCCATACAAAGAATGGAAGCACTTATCTTGGGAGCTCTACAATGGAGAATGCGGTCAATCACCCCCTTCTCTTTCATAACTTTCTTCATTACTTTGTCAAGGCTTAAGGACCCACCAATGGGGCAGGTTCTGAAAGACCGAGCAGCTGAAATCATATTCAAGTCACAAAGAGAGATAAAGCTTTTGGAATTCAAGCCATCTGTAATTGCTGCATCGGCACTTCTGTGTGCATGTCATGAGTTGTTTCCTTTTCAATATCCATGCTTCTTAAGAGAAATATCGGAATGTTCATATGTAAATAAAGAAAGCATGGTGCAGTGCTATAATGTGCTACAATATATAACCATCGAGGAGTACGAGTCTGTGTTCAATGGGGTTTCAAGTTCAGACACACCGGATAATGTGTTGGACCATCATTTTCTGAGTTCAGAGAGTGAAAAAACCAACGGAATCACGGTTAATACTCTTCCACTGAGACAAGAGAAGGACCTCAAAAGAAGGAAAATCACTGGTTAG 915 0.412 MEFDLENPLENFHDFHCDAVSSLFLIESDHIPSQNYFLTLKARDIDIFVRREVISLISQLSCTLDPVLSYLAINYLDRFMANQGILQPKPWALRLLAISCFSLAAKMMRTEFSATDIQALLKQSDGGIIFETQSIQRMEALILGALQWRMRSITPFSFITFFITLSRLKDPPMGQVLKDRAAEIIFKSQREIKLLEFKPSVIAASALLCACHELFPFQYPCFLREISECSYVNKESMVQCYNVLQYITIEEYESVFNGVSSSDTPDNVLDHHFLSSESEKTNGITVNTLPLRQEKDLKRRKITG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3681g00022 304 CDD CYCLIN_AtCycD-like_rpt2 153 244 - -
Gabi3681g00022 304 Gene3D - 33 151 - -
Gabi3681g00022 304 SMART cyclin_7 51 144 IPR013763 -
Gabi3681g00022 304 Gene3D - 22 242 - -
Gabi3681g00022 304 SMART Cyclin_C_2 153 278 IPR004367 -
Gabi3681g00022 304 FunFam D6-type cyclin 148 242 - -
Gabi3681g00022 304 PANTHER CYCLINS 34 249 IPR039361 -
Gabi3681g00022 304 SUPERFAMILY Cyclin-like 135 271 IPR036915 -
Gabi3681g00022 304 SUPERFAMILY Cyclin-like 11 150 IPR036915 -
Gabi3681g00022 304 Pfam Cyclin, C-terminal domain 153 263 IPR004367 -
Gabi3681g00022 304 FunFam D6-type cyclin 33 147 - -
Gabi3681g00022 304 Pfam Cyclin, N-terminal domain 24 150 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3681g00022 Gabi-Chr3681 287031 288659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3681g00022 1 299 Core Cell Cycle Gene Families AT4G03270 43.450 7.22e-77 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3681g00022 K18812 - gmx:100820404 446.817