Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3681g00004 ATGCGTTGGTCTTCCTTCTACCACACAGCCTCGAGGGTTTTTCATGAGTATCCATCCTGGTCCAAGTGTGTTGTTGTATGCACTGTCATCAGTGGTGGAGGTTTAGTGTCATATGGTGATGCAGGACCAGTACAAAGTGAATATGCTAATCAAAGCCAGAAAAAGAAGGTGGTGGTGCTTGGAACTGGTTGGGCTGGAACCAGTTTTTTGAAAAACATGAAAAGCTCCTCCTATGATATTCACGTGGTTTCACCACGTAACTATTTTGCATTCACTCCTTTGTTACCAAGTGTCACAATTGGCACAGTGGAGGCACGGAGCATTGTTGAACCTATTCGCAGTGTCGCCCGGAAGAGTGGTGTAAATATACAATTCAGTGAAGCTGAATGCTATAAGATCGATCCCAAGAACAACAAAGTTTACTGCCGTGCTGGTCAAGACAAAAAGCTGGGTGGTCTAGAAGAATTTTCCATTGATTATGATTACTTGGTAATAGCTATGGGAGCCCGTTCTAATACCTTTAACACACCCGGTGTTGAGGAGCATGCTCACTTCCTTAAGGAAGTGGAAGATGCTCTAAGAATTCGTCGAAAAGTGATTGACCTTTTCGAAAGAGCGAGCCTCCCTACTTTACCAGTGGAAGAGAAGAAAAAACTACTCAGTTTTGTAATTGTTGGTGGTGGTCCAACTGGAGTAGAGTTTGCTGCAGAGCTTCATGACTTCGTACATGAGGATATATCTAAATTATATCCTTCTCTTAAAGAATATGTGAAGATTACTCTCCTGGAGGCAGGCGATCATATCTTGAACATGTTTGACAAGAGAATTACGGAATTTGCTGAAGGGAAGTTCCAGAGAGATGGCATTGATGTGAAGTTGGGATCTATGGTGGTCAAAGTTAGTGAAAAGGAAATCTCTGCCAAAGAAAGAGGAACTGGTCAAGTTGTTTCTCTACCTCATGGAATGGTAGTTTGGTCAACTGGTATCGGTGCTCGCCCTGAATTACTTGATTTCATGAAGCAGATTGGCCAGATTAACAGACGTGCATTAGTCACTGATGAATGGCTAAGGATGGAAGGATATGACAACATCTATGCTCTAGGTGATTGTGCCACTATAAATCAGCGTAGAGTTATGGAAGATATAGCTGTGATATTTAGCAAGACAGACAAGAACAATTCTGGAACGTTAGATCTTAAAGAGTTTCAAGACGTTGTTGGTGACATTATAGAGAGGTACCCACAAGTGGAGATTTATTTAAAGAAGAACCAAATGAAAGATATCGCCACACTGCTAAAGCAATCTCAAGAAAGCTCTGTTTCAGTGAACATTGAATTCTTTAAAGAAGCTCTTTCCAAAGTAGATTCTCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTGCTCAACAAGGTGAATATCTTGCAGACTGTTTCAATCGCATGGAGTTGTGTGAGAAGTATCCTGAAGGCCCTCTTAGGTTCAGGGGGACAGGACGCCATCGGTTTCATCCCTTCAGGTACAAGCATTTTGGACAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGTCGTAGCTCCCAGTGGCTGTGGTATTCAATATATGCTAGCAAACTAGTCAGCTGGAGAACAAGGACATTGGTGGTATCTGATTGGGGAAGGAGATTCATATTTGGCAGGGACTCAAGTCGAATCTGA 1728 0.4253 MRWSSFYHTASRVFHEYPSWSKCVVVCTVISGGGLVSYGDAGPVQSEYANQSQKKKVVVLGTGWAGTSFLKNMKSSSYDIHVVSPRNYFAFTPLLPSVTIGTVEARSIVEPIRSVARKSGVNIQFSEAECYKIDPKNNKVYCRAGQDKKLGGLEEFSIDYDYLVIAMGARSNTFNTPGVEEHAHFLKEVEDALRIRRKVIDLFERASLPTLPVEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDISKLYPSLKEYVKITLLEAGDHILNMFDKRITEFAEGKFQRDGIDVKLGSMVVKVSEKEISAKERGTGQVVSLPHGMVVWSTGIGARPELLDFMKQIGQINRRALVTDEWLRMEGYDNIYALGDCATINQRRVMEDIAVIFSKTDKNNSGTLDLKEFQDVVGDIIERYPQVEIYLKKNQMKDIATLLKQSQESSVSVNIEFFKEALSKVDSQMKNLPATAQVAAQQGEYLADCFNRMELCEKYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGRSSQWLWYSIYASKLVSWRTRTLVVSDWGRRFIFGRDSSRI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3681g00004 575 SUPERFAMILY EF-hand 371 459 IPR011992 -
Gabi3681g00004 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 45 406 - -
Gabi3681g00004 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 380 IPR023753 GO:0016491
Gabi3681g00004 575 PANTHER NADH DEHYDROGENASE 49 575 IPR045024 GO:0003954|GO:0006116
Gabi3681g00004 575 SUPERFAMILY FAD/NAD(P)-binding domain 213 374 IPR036188 -
Gabi3681g00004 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Gabi3681g00004 575 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Gabi3681g00004 575 SUPERFAMILY FAD/NAD(P)-binding domain 54 273 IPR036188 -
Gabi3681g00004 575 Gene3D - 421 574 - -
Gabi3681g00004 575 Gene3D - 45 409 - -
Gabi3681g00004 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Gabi3681g00004 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Gabi3681g00004 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 349 371 - -
Gabi3681g00004 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Gabi3681g00004 575 SMART efh_1 381 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3681g00004 Gabi-Chr3681 19077 24732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3681g00004 1 575 Chloroplast and Mitochondria Gene Families AT4G21490 69.588 0.0 811