Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3681g00002 ATGACGATTGCATCCTTCTTCATGAGGGTCTCCAAGGCTCTTAACAGTTACCCTTCCTCCTCCCACCTTCTACTTCTCTGCACTCTCAGTGGTGGAGGTGTGATGGCATACTCAGAATTACAATCAGAAGCTGAACATCCTCGTATTGATGCTAATGAGCCTCAAAAAAAGAAAGTGGTGGTTCTTGGCACAGGATGGGCTGCTACCAGTCTCCTTAAGGGTCTGGATGCTTCATTATATGATGTTCAGGTTGTTTCGCCTCGAAACTACTTTGCATTTACTCCCTTATTACCCAGTGTCACTTGTGGAACAGTTGAAGCACGAAGCATTGTAGAGCCAGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAATAAAATTTTGGGAGGCAGAATGTGTCAAGATTGATGCTGCAAACAAAAAGGTTTTTTGTCAATCCAATATTGAAAACTTAGTGGGAAGTGGTGAATTTTCTTTGGACTATGACTTCTTGGTTGTAGCAGTAGGAGCACAAGTGAATACTTTTAACACCCCTGGTGTCAAGGAGAATTGTCATTTTCTGAAGGATGTTGAGGATGCTCAGAAGATCCGTCTGTCTGTGATAGATTGTTTTGAAAAGGCTGTTCTTCCTAGTTTATCTGAAGAAGAGCGAAGGTCAAATCTTCATTTTGTAGTTGTTGGAGGAGGCCCAACTGGTGTGGAATTTGCTGCAGAGCTGCATGATTATGTCCAAGAAGATTTAATTAAATTATATCCAACTGTTAAAGATTTAGTGAAGATAACATTGATTCAATCAGGAGATCACATCTTGAACATGTTTGACGAAAGAATAAGTTCATTTGCTGAGCAGAAGTTTTTGAGAGATGGTATAAAAGTTCAGACTGGATGCCGGGTTGTCAATGTTGGGGACAAGGAAATTACAGTGAAGGTGAAATCAACAGGAGAGGATTGCTCTGTGCCCCATGGATTGATTGTGTGGTCCACAGGCATTTCAACTATTCCAGTTATAAGGGACTTTATGGAAGAAATTGGTCAGGCTAAAAGGCATGTACTAGCAACTGATGAATGGTTGCGAGTGAAGGGATGCAAAGATGTGTATGCTATTGGTGATTGTTCTACAATAAATCAACGTAAAATCATGGATGATATCCTAGCCGTATTTGAGGCTGCAGACAAAGATCACTCTGGTACCTTAACTGTTGAAGAATTCCAGGATGTGATGGATGACATCCTCTTAAGATATCCACAAGTCCAACTATATCTAAAGAGGAAAAATCTGCTTGATTTCCACACTCTGTGGAAAGATTCACAGGGGAATGAAAAAAAGGAAATAGACATAGAAGGGCTTAAGCTGGCCCTTTCTCATGTAGATTCTCAGATGAAGAATCTGCCAGCAACTGCACAGGTTGCTGCCCAAGAGGGTGAATATCTAGCAAGATGCTTTAACCGCATGGATCATTGTGAAGAGCATCCTGAAGGTCCTCGACGATTTAGAGGATCTGGACGTCATAAGTTTCTTCCCTTCCGGTATAAGCATTTTGGGCAATTTGCTCCACTGGGTGGGGAACAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATTGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGTACTTGGTCCTGTCTGATTGGACAAGAAGATTCATATTTGGGAGGGATTCAAGTCGAGTTTAA 1734 0.4198 MTIASFFMRVSKALNSYPSSSHLLLLCTLSGGGVMAYSELQSEAEHPRIDANEPQKKKVVVLGTGWAATSLLKGLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEIKFWEAECVKIDAANKKVFCQSNIENLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSLSEEERRSNLHFVVVGGGPTGVEFAAELHDYVQEDLIKLYPTVKDLVKITLIQSGDHILNMFDERISSFAEQKFLRDGIKVQTGCRVVNVGDKEITVKVKSTGEDCSVPHGLIVWSTGISTIPVIRDFMEEIGQAKRHVLATDEWLRVKGCKDVYAIGDCSTINQRKIMDDILAVFEAADKDHSGTLTVEEFQDVMDDILLRYPQVQLYLKRKNLLDFHTLWKDSQGNEKKEIDIEGLKLALSHVDSQMKNLPATAQVAAQEGEYLARCFNRMDHCEEHPEGPRRFRGSGRHKFLPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVLSDWTRRFIFGRDSSRV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3681g00002 577 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 424 576 - -
Gabi3681g00002 577 SUPERFAMILY FAD/NAD(P)-binding domain 221 375 IPR036188 -
Gabi3681g00002 577 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Gabi3681g00002 577 PANTHER NADH DEHYDROGENASE 51 577 IPR045024 GO:0003954|GO:0006116
Gabi3681g00002 577 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 48 407 - -
Gabi3681g00002 577 SUPERFAMILY FAD/NAD(P)-binding domain 56 274 IPR036188 -
Gabi3681g00002 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 57 379 IPR023753 GO:0016491
Gabi3681g00002 577 Gene3D - 47 410 - -
Gabi3681g00002 577 Gene3D - 439 577 - -
Gabi3681g00002 577 SMART efh_1 382 410 IPR002048 GO:0005509
Gabi3681g00002 577 SUPERFAMILY EF-hand 336 463 IPR011992 -
Gabi3681g00002 577 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3681g00002 Gabi-Chr3681 11623 17490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3681g00002 5 577 Chloroplast and Mitochondria Gene Families AT4G21490 64.533 0.0 764