Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3677g00005 ATGTGTTCTACGTTTGAAGATATGGCCTCTGGTGAAGGGAGGGGGCATCATCATGATCTTGTGCCTCTTGCTGCGTTGCTCAAGAGAGAGATGAAGAGTGAGAAGATGGAGAAGCCCACTGTGAGGTTTGGGCATGCTGCTCAGTCTAAGAAAGGGGAGGATTATTTTCTAATTAAGACTGATTGTCAGCGAGTGCCTAGGAACTCTTCATCATCCTTTTCTGTATTCGCGATCTTTGATGGGCACAATGGAAATGCTGCTGCTATTTTTACCAGGGAGAATTTGTTAAATCATGTGTTGGGTGCTCTTCCTCGAGGGCTTGGACGAGAGGAGTGGTTGCAAGCTTTACCTCGGGCATTGGTTGCTGGGTTTGTTAAGACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCCACGTTTGTGATAGTGGATAAATGGACTGTGACAGTTGCATCTGTTGGAGATTCCCGTTGTATACTAGATACACAGGGTGGTGCTGTTAACAACTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGAGAACGTGTTACTGCAAGTGGAGGTGAAATTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCCCTTCGTTGCTGGCCAGGGGGTCTATGCCTTTCCAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAGGTTAAGCTATCAAATGCTGGCGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCGCTGTCTTCAGAAATGGCAGCAAAGTCTTGCCGCGGTTTGCCTGCCGAGCTTGCTGCTATGCAGGTTGTCAAGGAAGCACTACGAACAAGAGGGTTAAAGGACGATACAACTTGCATAGTTGTTGACATAATACCACCAGAGAATGAATTGCCACCAACACCTCCCCCCAAAAAGCGGAACAAGTTGAGAGATCTTTTGTTCAGGAAAAGGCCGCGTGATTCTGCTGGTAAGCTGTCAAAGAAGCTTTCAGCTATAAATATAGTGGAGGAACTATTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGACAACTCAGGGCAATCAACATCTGGCCTTTTTGTATGTGTTGTATGCCAAGTTGATCTTGCTGCAAGTGAGGGAATCTCTGTCCACGCAGGTTCCATTTTTTCCACCAGCTCGAAGCCCTGGCAAGGTCCTTTTTTATGTTTTGATTGTCGCGATAAGAAGGATGCTATGGAAGGAAAACGTCCTAGTGGAGTTAAAGTGTCATAG 1308 0.4549 MCSTFEDMASGEGRGHHHDLVPLAALLKREMKSEKMEKPTVRFGHAAQSKKGEDYFLIKTDCQRVPRNSSSSFSVFAIFDGHNGNAAAIFTRENLLNHVLGALPRGLGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDKWTVTVASVGDSRCILDTQGGAVNNLTVDHRLEENIEERERVTASGGEIGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPENELPPTPPPKKRNKLRDLLFRKRPRDSAGKLSKKLSAINIVEELFEEGSAMLAERLGNDDNSGQSTSGLFVCVVCQVDLAASEGISVHAGSIFSTSSKPWQGPFLCFDCRDKKDAMEGKRPSGVKVS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3677g00005 435 Pfam Protein phosphatase 2C 68 276 IPR001932 -
Gabi3677g00005 435 SMART PP2C_SIG_2 58 304 IPR001932 -
Gabi3677g00005 435 SMART PP2C_4 34 302 IPR001932 -
Gabi3677g00005 435 FunFam probable protein phosphatase 2C 5 42 309 - -
Gabi3677g00005 435 PANTHER PROTEIN PHOSPHATASE 43 303 IPR015655 GO:0004722|GO:0006470
Gabi3677g00005 435 Gene3D - 42 309 IPR036457 -
Gabi3677g00005 435 CDD PP2Cc 43 304 IPR001932 -
Gabi3677g00005 435 SUPERFAMILY PP2C-like 47 304 IPR036457 -
Gabi3677g00005 435 ProSiteProfiles PPM-type phosphatase domain profile. 35 304 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3677g00005 Gabi-Chr3677 32755 38166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3677g00005 8 434 PP2C-type Phosphatase Gene Family AT1G68410 80.275 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3677g00005 - - gmx:100779571 780.4