Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3672g00001 ATGACGGATATCCCAAATGAAGTGGCAAAGAAAGTTCTGGATAAAGTTATCGACCGGGCATTAAAAGAAGCAGGGTATATGTGTTGCTTGAGGGACAATGCTGCTGACAATAAAAAGCAAAAAGGAAAGTTGGAAGCAAAACTAAAGGCTGTGAAGCAACATTGTGATGCGACAACCAGCAACGCACAAGATGCTCCAAATGATGTCGTTAACTGGATAGAGGAAGCTGATAAGGCCATTCAAGAGGACACCAAAATAGAAAAGACATGGTATTTAAGATGGGGTCCCTTCTGGCAGCGATATAGTAAGGGAAAGGCACTGTCAAAAAACACGGAGGCGATTACAGGACTCTTGCAAGAAGCTGAAACCTTGAAAACTGAGGGAGTACCTTCTGATCATCCAGGTGTCAAACGCTTTCCTTTAAACAGTTACCTCTCTCTGAATGGCAGAAAGTTGAAATGCGAAGAACTTTTGAATGCACTGAAAAATGACAACAACTGTATAACCGTGTTGCAAGGTATGGGCGGCATCGGTAAGACTACATTGGCAATAGAAGTGGGTCAGGAACTCGAGCAATTGGAAGAATTTAAAAAAGTTGTTGTTACTACAGTGTCATCTACTCCTGACATAAGAAAGATTCAAGATGATATTGCTGCACAGTTGAAATTAGAATTGAAGGACAAGACTGAATCACAACGACAAGGATTACTGTGGAATAGATTAACCAATGGTGAGAAAATTCTTCTAATATTGGATGACGTATGGGAAAATACTGTGAAGCATGTCGAATTTGATAAAATAGGGATTCCAGGTAGGGGCCAACACAAGGGTTGCAGAGTTCTTCTAACCACACGGGAGGTAAGTGTATTCAACTCAATGGGATGCGACAGGATAATTAATCTGGATCTCTTATCAGATGAAGACGCATGGACCCTGTTCCAGAAGTTTGCTGGTTTAAGCGATAGTTCAACTCCAAGTTTGCGGGATAAGGGACATCAAATTGCCCGAGAATGCGGAAAATTACCACTTGCAATTGAAGTTGTGGCTAAAAGATTAAAGGGCCAAGAACAACGACAGGAGAAATGGGATCATGTCTTAACGTCCTTGAAAAATGCTATGCCCGTACACGGTGCTGATCAAAGTTTGAATGTAGTTTATAAATGTTTGAGATATAGCTATGATAATTTGGAGAAAGAAGAAGCCAAGAAACTGTTCCTCTTATGTTCTTTGTTCCCAGAAGATAAAGAGCTTCCTGCTGAAATTTTAACTAGATATGGCATAGGAGCTGGTCTTTTTGGGGAAGTTTTTAACAAATACAATGTTGCTCGATTAAAAGTAGCTGATGCCAAATATGATCTCATAGATTCTAGTTTATTATTGGAGGCTGAGAAAGGAAGGGTAAAAATGCATGACTTGGTTCGAGAAGTTGCTCTATTGATGGCTAACAAAGAGATTCGAGCAATGAATTTGTCTGACAAACATCAAATGTCATTGGTAAAAATGGAGAAGAGTATGAAATATTTGTTATTGGAAGGCAACGACAAGGATGTGTTTTCTTATAGGTTTGATGATTCCGAACTTGAGATTCTTAAAGTTAGCTGTATGGTTGAAGGAGGCTCAATGGCAATGCTAAAGTCATTCTTCGAAAATATGAAAAAGCTTCGAGTTTTACATTTATCATCTCAGGATTGGAGGAGAACGTCTCTATCATTGCCACAGTCAATCGAGTCATTGACGAATATTCGATCTCTAATCCTGGAAAGATTGAGATTAGGTGACATCTCTATTCTGGGAAAACTACAAAGCCTCGAGGCCCTTGATTTGGTTCGTTGTGAAGTGGTCGAATTGCCACGTGAAATTGCGGAGCTAAAGAGACTTAGATTGCTGAAGTTGGATCATTGTGAAATTGGAGGGAATAATGCATTTGAAGTGATTGAAAGATGCTCATCACTAGAAGAATTGTATTTCATTAAATTCAAGGTTCACAGCTCAGCCATTCATAAGAAAATAACCTTGCCTCCTGCATTGCAAAGGTATCATATAAGAGATCAGTATCGGTATGGGTTTGGTATTGAAGCGTACGATTCAATATCAAAATTTGTGTCTATTCTAAATATTGATACTTATTTCTCTGAAACAACATTCAAGGATCTGGTGCAAACAGCAGAGGCTCTTGAGCTAGAAGGATTTAAGGGGGAGTGGAGAAATCTCATACCTGATACTGTTCCGATAGATCATCTAGTGAAGCTTTGTTTGAAATCTTGTTCAAAATTACAATTTCTAATTGACAGTCGGCGTATTACTCCGGAACAAAACATCACCTCCAAGTTGAATGTACTAGAATTGACGGAAATGAAAAATTTGGAAGAACTATGCAATGGTCCCCTTCCCTCTGACTTTCTGAAGAGTTTAGAGACGCTAAGTATCAAATCCTGTAAAGTTTTGCGAAGCAGATTGTTTAAGAGCAAGCTAAACGTCTCCAATCTCAAGACCATTACACTGCGGGATTGCCCAAAGTTGGTAACCCTATTTCCATTGTTGACTTCTCAAAGCCTAATGCAGTTGGAGGAATTGGGGATACATGACTGTGAGCAACTGGAAAACATAATAGAAGATGAAAGAACTGGGGAGGAATTGGGAGACAAAACAGTTGATGGTGATAATGATAACAAGGGAAAAAGTCCCGGTTCAATGTTTCCAAAATTGAAAACTCTTTATATCGAGAGATGTCCCCTACTGGAATTTATACTTCCGGTCCTTTCTGCTCGAGACGTTCCTGTACTAGAATCTGTCACTATAGGATACATATTTGGCAAATACCAACATGAAAATGAAGAGCTGGATTTGCATCAAGAGGTAAAGGATGTCGTACTTGCTTCATTGCAAAAAATGTTGCTCACTTCCTTGCCAAGTTTCATCGACATTTTTGCCAAAAGTTATCGTCCCGAGTGTTCGTCCAGAAAGAGTTTATCTTCCAAGTCACAAATGCAATCGGAGCCAATGAAATGCAATATCTTCACATTGACTCATAAATATAGACACAAATTGAGGAGTTCCACAAGTGCTCAAATCCCATTGCATCGCTTCTCAGCCTCATCGGCATCGAACTCATACCATCTTCAGCTTTGGGAAGGTGCTCAATGTCTTTCAAAACAATTCCAGATCCTGCGTAACATGAAAGAGATTCAACTATGGAATCTTCCAAGGATAGAATCCGTATTTATTCTGTCTATTGCTCCAACAATGGTTTTGGAAACTTTGATAGTTCAGCATTGTCGTAAATTGAAGCACATAATAATAGATAATGGAGATGACAGCGGTGGCAAAGACTGGGGCAATGTCTTTCCAAAATTAAGAAAGCTCTCCGTGAGCTTTTGTAGGAAATTGGAATATATATTTGGGCAGTACCCTGATGATCATCAAAACCATAATGAGATTCACCTTCATCTTCCAGCATTGAAATATCTCTATCTTTTCAATCTGCCAAATTTAATCGGCATTAGCCCTAAAAATTATCGCACATCGTCGCCACCTTTGACTGGGTTTGAACTCAATGAATGTTCCCAGTTAACCATTAAATGTATTGGTGATTTGATGGTTCAAATGGATTCAAGACAACAGGATGCCACAACCACCAAGGTTTGA 3645 0.3929 MTDIPNEVAKKVLDKVIDRALKEAGYMCCLRDNAADNKKQKGKLEAKLKAVKQHCDATTSNAQDAPNDVVNWIEEADKAIQEDTKIEKTWYLRWGPFWQRYSKGKALSKNTEAITGLLQEAETLKTEGVPSDHPGVKRFPLNSYLSLNGRKLKCEELLNALKNDNNCITVLQGMGGIGKTTLAIEVGQELEQLEEFKKVVVTTVSSTPDIRKIQDDIAAQLKLELKDKTESQRQGLLWNRLTNGEKILLILDDVWENTVKHVEFDKIGIPGRGQHKGCRVLLTTREVSVFNSMGCDRIINLDLLSDEDAWTLFQKFAGLSDSSTPSLRDKGHQIARECGKLPLAIEVVAKRLKGQEQRQEKWDHVLTSLKNAMPVHGADQSLNVVYKCLRYSYDNLEKEEAKKLFLLCSLFPEDKELPAEILTRYGIGAGLFGEVFNKYNVARLKVADAKYDLIDSSLLLEAEKGRVKMHDLVREVALLMANKEIRAMNLSDKHQMSLVKMEKSMKYLLLEGNDKDVFSYRFDDSELEILKVSCMVEGGSMAMLKSFFENMKKLRVLHLSSQDWRRTSLSLPQSIESLTNIRSLILERLRLGDISILGKLQSLEALDLVRCEVVELPREIAELKRLRLLKLDHCEIGGNNAFEVIERCSSLEELYFIKFKVHSSAIHKKITLPPALQRYHIRDQYRYGFGIEAYDSISKFVSILNIDTYFSETTFKDLVQTAEALELEGFKGEWRNLIPDTVPIDHLVKLCLKSCSKLQFLIDSRRITPEQNITSKLNVLELTEMKNLEELCNGPLPSDFLKSLETLSIKSCKVLRSRLFKSKLNVSNLKTITLRDCPKLVTLFPLLTSQSLMQLEELGIHDCEQLENIIEDERTGEELGDKTVDGDNDNKGKSPGSMFPKLKTLYIERCPLLEFILPVLSARDVPVLESVTIGYIFGKYQHENEELDLHQEVKDVVLASLQKMLLTSLPSFIDIFAKSYRPECSSRKSLSSKSQMQSEPMKCNIFTLTHKYRHKLRSSTSAQIPLHRFSASSASNSYHLQLWEGAQCLSKQFQILRNMKEIQLWNLPRIESVFILSIAPTMVLETLIVQHCRKLKHIIIDNGDDSGGKDWGNVFPKLRKLSVSFCRKLEYIFGQYPDDHQNHNEIHLHLPALKYLYLFNLPNLIGISPKNYRTSSPPLTGFELNECSQLTIKCIGDLMVQMDSRQQDATTTKV 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3672g00001 1214 Gene3D Ribonuclease Inhibitor 484 723 IPR032675 -
Gabi3672g00001 1214 Pfam NB-ARC domain 154 395 IPR002182 GO:0043531
Gabi3672g00001 1214 Gene3D Ribonuclease Inhibitor 960 1206 IPR032675 -
Gabi3672g00001 1214 Gene3D Ribonuclease Inhibitor 774 954 IPR032675 -
Gabi3672g00001 1214 FunFam Probable disease resistance protein At1g61300 136 297 - -
Gabi3672g00001 1214 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 933 - -
Gabi3672g00001 1214 Gene3D - 393 478 IPR036388 -
Gabi3672g00001 1214 Gene3D - 303 392 IPR042197 -
Gabi3672g00001 1214 Gene3D - 135 299 IPR027417 -
Gabi3672g00001 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 408 IPR027417 -
Gabi3672g00001 1214 SUPERFAMILY L domain-like 468 922 - -
Gabi3672g00001 1214 PRINTS Disease resistance protein signature 338 352 - -
Gabi3672g00001 1214 PRINTS Disease resistance protein signature 241 255 - -
Gabi3672g00001 1214 PRINTS Disease resistance protein signature 168 183 - -
Gabi3672g00001 1214 PRINTS Disease resistance protein signature 598 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3672g00001 Gabi-Chr3672 11212 15230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3672g00001 145 634 WRKY Transcription Factor Family AT5G45050 22.122 5.09e-12 68.9