Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3671g00001 | ATGCGGTTTGTGTGGCCATATGGCGGAAGGAGTGTGTTTCTCAGTGGTTCTTTCACACGGTGGTCTCAGCTTCTTCCACTGTCGCCAGTCGAAGGTTGCCCAACTGTGTTTCAAGTCATTTATAGCTTGCCCCCTGGTTATCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCAGCATGATGAGCATCAGCCTTTTGTACCTGGAGAATATGGGATAGTCAACACTGTCTTCTTGGCTACTGATCCTAACTACATACCTGTTTTAACTCCAGATATTGCTTCTGGAAATAACATGGATGTGGATAATGAGGCTTTTCGCCGTGGGGTTCGGTTGACGGATGGTACATTGAGTGAGGTTCTGCCAAGAATATCAGATGCTGATGTACAGATCTCCTGTCAGCGTATTTCTGCATTTCTGTCTATGCACACAGCTTATGAATTATTTCCTGAGTCAGGCAAGGTTGTTGCCTTGGATGTTGATCTGCCAGTGAAACAGGCATTTCATATACTGCATGAGCAGGGAATTTTCATGGCTCCACTTTGGGACTTCTGCAAGGGACAATTTGTTGGTGTTCTTAGTGCTTTGGATTTTATTCTAATTTTAAGAGAGGTGCGTGCTGTCAATTTGGATTATGGGTTTACAATATTTGAAAGCCTCAATGCACTGGTGAAAAGTCCAAAATACCCTGCGAAAGACACCCTTATCGGTGTAGACACGTCGTTCGTCACAACACTCGTCCGTATCAATCTTGAACACAGAACCAGGATTAATCTGTGTCATGTAGGTCAGCCAACCAGGTAA | 804 | 0.4403 | MRFVWPYGGRSVFLSGSFTRWSQLLPLSPVEGCPTVFQVIYSLPPGYHQYKFFVDGEWQHDEHQPFVPGEYGIVNTVFLATDPNYIPVLTPDIASGNNMDVDNEAFRRGVRLTDGTLSEVLPRISDADVQISCQRISAFLSMHTAYELFPESGKVVALDVDLPVKQAFHILHEQGIFMAPLWDFCKGQFVGVLSALDFILILREVRAVNLDYGFTIFESLNALVKSPKYPAKDTLIGVDTSFVTTLVRINLEHRTRINLCHVGQPTR | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3671g00001 | 267 | FunFam | Sucrose nonfermenting 4-like protein | 1 | 81 | - | - | |
Gabi3671g00001 | 267 | Gene3D | Immunoglobulins | 1 | 88 | IPR013783 | - | |
Gabi3671g00001 | 267 | Gene3D | - | 123 | 248 | IPR046342 | - | |
Gabi3671g00001 | 267 | PANTHER | 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT | 2 | 79 | - | - | |
Gabi3671g00001 | 267 | CDD | E_set_AMPKbeta_like_N | 2 | 78 | - | - | |
Gabi3671g00001 | 267 | SUPERFAMILY | CBS-domain pair | 135 | 212 | IPR046342 | - | |
Gabi3671g00001 | 267 | ProSiteProfiles | CBS domain profile. | 148 | 208 | IPR000644 | - | |
Gabi3671g00001 | 267 | SUPERFAMILY | E set domains | 2 | 80 | IPR014756 | - | |
Gabi3671g00001 | 267 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 2 | 79 | IPR032640 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3671g00001 | Gabi-Chr3671 | 5050 | 8768 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3671g00001 | 8 | 98 | Protein tyrosine phosphatase (PTP) family | AT3G52180 | 32.979 | 4.10e-07 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3671g00001 | - | - | gmx:100785692 | 396.356 |