Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi366g00006 ATGGGTTGCTTACACTCCAAAACCACTCATCTCCACTCTCCTGAAGACCCTTCCACCGCCTTACCCGACTCCAAGAAACCCGATCCAGGTAATGGTGGGGATGATGTTGATCAAGAGTGTCAGGCTCCAACATTTAAAGAGTACGGTCTGAATGAACTCCGAAAGGCCACAAATGGGTTCAGCACAGATTGCATTGTCTCTGAGAGTGGTGAGAAAGCTCCCAATATAGTCTACAGAGGGAAGTTTGAGAACAATCGGTTAGTTGCTGTTAAGCGGTTCTCCAAACTGTCCTGGCCTGATGCTCAACAGTTCAGGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAAAGACTTGTGAATCTAATTGGTTGTTGTGCTGAAGAAGATGAAAGGCTCTTAGTAGCTGAATACATGCCAAATGATACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCCCAGGCGCTAGATCATTGTAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCGTATAGGATTCTTTTTGATGAGGATGGTGATCCCCGTTTATCAAGTTTCGGGCTCATGAAAAATAGTAGAGATGGGAAAAGCTACAGTACTAATTTAGCTTATACTCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTGATCTACAGCTATGGAACTATTCTTCTGGATCTTCTGAGTGGCAAGCATATTCCTCCAAGCCATGCTTTGGATCTAATTAGAGGGAAAAATGCATTGCTGTTGATGGACTCATCCCTAGAAGGGCAATTTTCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGACCGACCTGATATTAAGTTTCTTCTTACTGCAGTTGCACCTCTTCAAAAACAGAAAGAGGTAACATCTCATGTATTAATGGGTCTTACTAAAAACACAGCAGTGCTACCGACCATGCTTTCTCCACTTGGAAAGGCTTGTGCAAGGATGGATTTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGATAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGACATCTTGAATACAAAAAAGTTTGGGGATATTGCATTTAGAGACAAGGATTTCAAAAATGCAATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCCACTGTCTTTGCAAGGAGAGCCTTCTCCTACTTGATGAATGATCAGGCAGAACTTGCATTAAGGGACGCCATGCAGGCACAGGTATGCATACCTGATTGGCCAACTGCATTCTACCTGCAGGCTCTTGCTCTCTCAAAGCTGGGAATGGAAACTGATGCACAGGACATGCTTAATGATGGGGCTGCCTTTGAAGCAAAGAGGTAA 1473 0.4311 MGCLHSKTTHLHSPEDPSTALPDSKKPDPGNGGDDVDQECQAPTFKEYGLNELRKATNGFSTDCIVSESGEKAPNIVYRGKFENNRLVAVKRFSKLSWPDAQQFRAEAAGVGKVRHKRLVNLIGCCAEEDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTILLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQFSNDDATKLVELASKCLQFEARDRPDIKFLLTAVAPLQKQKEVTSHVLMGLTKNTAVLPTMLSPLGKACARMDFTAVHDILLKTGYKDEEGADNELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKR 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi366g00006 490 FunFam probable serine/threonine-protein kinase At5g41260 140 331 - -
Gabi366g00006 490 SUPERFAMILY TPR-like 387 482 IPR011990 GO:0005515
Gabi366g00006 490 Pfam Protein kinase domain 77 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi366g00006 490 MobiDBLite consensus disorder prediction 1 39 - -
Gabi366g00006 490 Gene3D Tetratricopeptide repeat domain 386 490 IPR011990 GO:0005515
Gabi366g00006 490 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Gabi366g00006 490 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
Gabi366g00006 490 FunFam probable serine/threonine-protein kinase At4g35230 35 138 - -
Gabi366g00006 490 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Gabi366g00006 490 FunFam probable serine/threonine-protein kinase At4g35230 386 490 - -
Gabi366g00006 490 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi366g00006 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 34 490 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi366g00006 Gabi-Chr366 74207 80388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi366g00006 14 317 Glycoside Hydrolase AT3G07070 33.639 1.64e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gabi366g00006 Pkinase 5.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi366g00006 K14500 - gmx:100793576 951.429