Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi366g00002 ATGGGAAGTGGACTTTCCACCCTCTGTTCCTGCTTCGAACCGGTGAACCGGACCAACGAACCGGACCACCAAGACGTGATATTCACGGCCACCGACCCATTGGACGAAACCCTAGGTCACTCCTTCTGCTACGTCAGATCCTCCGCACGCTTCCTCTCTCCCTCTCATTCCGATCGCTTCCTTTCCCCCTCTTCCTCCCTCCGTTTCTCCCCAACCCACGAACCCGTCCCCAGGACCCGACCCGAATTTCATGAAACCGGCTTCAAATCCATTTCCGGAGCCTCCGTCAGCGCCAACAGCTCCGTCCCTAAAACCGTTATACAGTTAGACGAAGAAGCCGTAGATTGCTGCGGCGGAGCCGCCCTCAGGGGCAATATTGTCAATGGGTTCGAAAGCACGTCGTCGTTTTGCGCTCTCCCGCTTCAGCCTGTGCCCCGAGGGGGTGAACCGTCTGGAAGCTTCGAGAGGGGCGGTTTCTTTCTCTCCGGACCAATTGAGAGCGGCGGCGCCGCCGAAGGCGGCGTCTCCGGCGGAAACGATGTCCCTTTCTCGGCGCCTCTAGGCGGGCTCTACGCGAAGAAGAAGAAGAAGAAGGGTGTTTCGGGTTTCCGGAAGGCGTTTCACCGGAACGACTCGGAGAAGAAGAGACCGTGGGTGGTGCCGGTGCTGAACTTCGTCGGGAGGAAGGAGGTTCCGGCGAGCGAGGGGAAGCCGCCGGAGGCTAAGAGTGAGAGCAATAGCAATGTGCAGTGGGCGCTTGGGAAGGCTGGGGAGGATCGGGTTCACGTGGTGGTGTCGGAGGAGCAGGGGTGGTTGTTCGTGGGGATATACGACGGTTTCAATGGCCCCGACGCGCCGGAGTTTCTGATGGGTCATCTCTACCGTGCAGTTCACAACGAACTGCAGGGTTTGTTCTGGGAAGTTGAAGCTGAAGAGAGTAGCAATCACCCCGCCGAAAGTGGTGTGCTGAAAAACGATGATTCGGCTAAGATGGTAGAGGGAACGGAGAGTAGACGGCGTAGGCTGTGGGAGTTTCTTGCTGAAGACCCTGAAGATGGACTTGATCTTTCGGGGTCGGATAGGTTCGCGTTTTCAGTTGATGATGCATTGAGCGTTAGCAATGGCAATGCGGGTTCAGCAGTTAGTAGACGGTGGCTGTTGTTATCGAAATTGAAGAATGGATTGACAAAGCATAAGGAGGTTCATGGTAGGAAGTTGTTGCCGTGGAATTTGGGGACAGAGGACAAAGAGAAGGGGGAGAATCGGGCGGAAGGCAAGCTTTGTGATGGTGATGGTGGTGGTGGTGGTGGAAGGAAGCGGAAAGTGGGTCCGGTGGATCATGATCTGGTTTTGAGTGCAATGTCTCGGGCTCTCCAAGTGACGGAGCTTGCATATTTGGATATGACGGATAAACTTTTGGATACAAATCCTGAACTTGCTTTGATGGGTTCATGCCTATTAGTTGTTTTAATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGCCGAGCTATTGTTGCACACTATGAGCCTAAAGAGGTTAATTCTAATGTGGAATCCAGAAACAAGGGAGATATTGGGTCGAGCACCGAGAGCATTGTTGAGGAGTCCTTAGGTTTAGGTCAAAGTGAAAGTGCAATCAAGTTGGGGAATGAGGGTCCTGCTCTAGAAATGAGGTTGGTCGCATTGCAGCTGTCTACTGACCATAGCACGAGCATTGAAGATGAAGTCATTAGAATTAAGAATGAACATCCTGATGATACCCAATGTATAGTCAATGATAGAGTTAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCAAAGTGGAACGATGCAGTACTAGAAATGTTTCGTAATCAATATATTGGCACTGCTCCATATATATCCTGCTGTCCTTCACTACGTCACCATAGATTATATCCGAGAGATCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATCTAACCAATGAAGAAGTGGTTTCTCAAGTTCAGAGCTTCATGGAAAAGTTTCCAGAAGGAGATCCTGCCCAACATTTAATAGAAGAGCTGCTCCTCCGTGCAGCCAAGAAGGCTGGGATGGATTTTCATGAGTTGCTGGATATCCCACAAGGAGATAGGAGGAAGTATCATGATGATGTGACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAGTCGTCAGGGAAGTATCTGTGA 2235 0.5087 MGSGLSTLCSCFEPVNRTNEPDHQDVIFTATDPLDETLGHSFCYVRSSARFLSPSHSDRFLSPSSSLRFSPTHEPVPRTRPEFHETGFKSISGASVSANSSVPKTVIQLDEEAVDCCGGAALRGNIVNGFESTSSFCALPLQPVPRGGEPSGSFERGGFFLSGPIESGGAAEGGVSGGNDVPFSAPLGGLYAKKKKKKGVSGFRKAFHRNDSEKKRPWVVPVLNFVGRKEVPASEGKPPEAKSESNSNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHNELQGLFWEVEAEESSNHPAESGVLKNDDSAKMVEGTESRRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNGNAGSAVSRRWLLLSKLKNGLTKHKEVHGRKLLPWNLGTEDKEKGENRAEGKLCDGDGGGGGGRKRKVGPVDHDLVLSAMSRALQVTELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKEVNSNVESRNKGDIGSSTESIVEESLGLGQSESAIKLGNEGPALEMRLVALQLSTDHSTSIEDEVIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNQYIGTAPYISCCPSLRHHRLYPRDQFLILSSDGLYQYLTNEEVVSQVQSFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi366g00002 744 MobiDBLite consensus disorder prediction 415 441 - -
Gabi366g00002 744 CDD PP2Cc 446 732 IPR001932 -
Gabi366g00002 744 Gene3D - 231 739 IPR036457 -
Gabi366g00002 744 ProSiteProfiles PPM-type phosphatase domain profile. 242 732 IPR001932 -
Gabi366g00002 744 Pfam Protein phosphatase 2C 566 700 IPR001932 -
Gabi366g00002 744 SUPERFAMILY PP2C-like 254 733 IPR036457 -
Gabi366g00002 744 SMART PP2C_4 242 730 IPR001932 -
Gabi366g00002 744 PANTHER PROTEIN PHOSPHATASE 2C 239 731 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi366g00002 Gabi-Chr366 31948 37057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi366g00002 1 744 PP2C-type Phosphatase Gene Family AT2G35350 56.420 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi366g00002 - - mtr:11415473 1078.93