Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3668g00026 ATGTTTGTGTTGAAGCTTGACAACCTGAGTCTTTCGGCTGATGGTGTGGAAAATAGTCTGAGGTTGACTCAGTTGTCTACTCAGTCCTCATATTATTTCGAAAATGATTTTCTTAAGGAGACTGAAAAGAAGTCTATTAGTGATGTGAAGCTTTGTGGTGAGGTTACAACGTGTATCACATATGGGACTATAAAATCTATTGAGAGAAAATACAACTTGTGGTACAAGTCTTGCAAGAAATGTCCATTTTCTGTTTGTGAGGATTTTGAGAAGCGGTACTGTAAGAACTGCCAAAAACATTGGGATGATTATTATCCAAGATTTAGTGTTCAGGTCAGAGTTGTGGATAACACTGATTTTGCATCATTTCTTCTGTTTGATCGAGACTGTTTTACTTTGTTGGGAATAAGCGTTGGTGAATTGCGCGAGCGACATTTCAAGAGGGGTGCAGATTTGGATCAATTTCCAGAAGAAATGAATGTTCTAAATGAGAAGTCAATGTTGTTTAAGATAATTGTGAAGCAAAAGGATTTGAACTCATACAGTGAGCCAAAATATCAAGTTTCCAAAATTTGTATTAGCGAAGAAATAATCTCAACGTTCATTAAGTCTCTGATCGATCCAACATAA 630 0.3635 MFVLKLDNLSLSADGVENSLRLTQLSTQSSYYFENDFLKETEKKSISDVKLCGEVTTCITYGTIKSIERKYNLWYKSCKKCPFSVCEDFEKRYCKNCQKHWDDYYPRFSVQVRVVDNTDFASFLLFDRDCFTLLGISVGELRERHFKRGADLDQFPEEMNVLNEKSMLFKIIVKQKDLNSYSEPKYQVSKICISEEIISTFIKSLIDPT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3668g00026 209 SUPERFAMILY Nucleic acid-binding proteins 42 191 IPR012340 -
Gabi3668g00026 209 Pfam Replication factor-A C terminal domain 60 191 IPR013955 -
Gabi3668g00026 209 CDD RPA1_DBD_C 58 191 IPR047192 -
Gabi3668g00026 209 Gene3D - 26 200 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3668g00026 Gabi-Chr3668 520443 521872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3668g00026 60 192 Core DNA Replication Machinery Family AT5G08020 25.373 2.06e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3668g00026 - - adu:107466248 137.117