Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3668g00019 ATGAAAATAGTGTTATTTCTTTCGTTCTTTTTATTCTCCTATGTTAGAACCTGCACTTCCCTAGACAGTTTAGCAGTGAGTCAATCCATCCAAGATGGTCAAACTTTAGTTTCAGTAGATGGAACTTTTGAAGTGGGTTTCTTCACACCTGGAAATTCAGCAAGTCGATATTTGGGTGTGTGGTACAGAAATTTATCACCTTTAACTGTGGTGTGGGTAGCCAACAGGGAAACACCACTCCAGAATAATTCAGGAGTCTTGAAACTCAATGAAGATGGGGTTCTTGTGCTTCTCAATAGCACAAACAGCACTGTTTGGTCGTCAAAGATATCAAAGGAAACAGTGAATAATCCAATTGTTCAGCTCCTGGACTCGGGAAATCTTGTCTTGAAAAATGGAAAGGATACTAAGGAGGACCAGATCTTGTGGCAAAGTTTTGATTATCCATGTGATACATTATTGCCAGGAATGAAGCTTGGATGGAACTTAGTAACTGGTCTAGACAGGTTTTTAACATCATGGAAAAGTGCAGATGATCCAGCTAGGGGAGAGTTTTCTGTGCATATTAACATTGGAGGATATCCACAACTAGTTTTTATGAAGGGATCTGTTATAAAATCTAGAATTGGATCATGGAATGGCCTTGGTTTTACTGGATACCCAATTCAACCATTGATAGGAAAACAAAGGTTTATATTTGTCGTGAATGCTGAAGAAGTGTATCATCAATATGAAGTCCTTGATAGCACGTTTGTCTCTATATATACATTGAGCCCTTCAGGCCTTTTGCGGAGTTTAGCTTGGACAAGTAAAACAAGTGATCAGAAAGTTATTGAAACTGGTCTAGACTCGTGTGATATTTATGCTATGTGTGGTGCAAATTCTATATGCAATATGAATGGTAATGTTCCGAAATGTGAATGCCTTGGAGGATATGTTCCTAACTTTCCTGAACAATGGAATATATCATTTTGGGCTGGGGGTTGTGTTTCAAGGAACAACTCTACTTGTAAAAACAGAAACAGTAGCACTGATGGCTTCTGGAAATACAAACAGTTGAAAATTCCAGACACGTCTTCATCTTGGTATAGTACGACCATGAACCTTGAGGAATGCCACAAGTCATGTCTGAAAAACTGTTCATGCACAGCATATGCAAATTTGGATGTCCGTAATGGAGGAAGTGGCTGTCTACTTTGGTTTCATGATCTGGTTGACACGAGGATTTTCTCTCAATGGGGACAAGACCTTTATATAAGAGTCCCTGCATCAGAACAAGATCAGGTTGCGGATAATGGCCACGGATATACACAGAAGAAGATGGTTGGAATCACAATTGGATGGATTATTTTTGGATTCATTACATGTGTCTCCATGCTGATACTTAGAAAGCGAGGTAAATTCTGTATTCGATTATTTCAATGGCGGCAAGAATATTTTAGATTGAGGAAGGATGACATGGATCTGCCAACATTTGATTTGTCAATCATTGCAAAAGCCACTAATAACTTTTCTAGCAGAAATAAACTGGGTGAAGGTGGATTTGGACCAGTATATAAGGGTACACTGATAGATGGGCAAGAGGTAGCAGTAAAACGGCACTCAAAGAAGTCTGATCAAGGATTGGAGGAGTTCAAAAATGAAGTTGCATTGATTGCAAAACTTCAGCATCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGAAGGAGAGGAAAAAATGTTGATCTATGAATACATGCCCAATAAGAGCTTAGACTACTTCATCTTTGATGAAACTAGAAGAAAGCTCTTTGCCTGGCTTCAGCGTTTCCACATAATTGGTGGTGTTGCTCGAGGGCTTCTCTATCTTCATGAAGACTCTAGACTGAGAATTATTCACAGAGATTTGAAAACCAGCAATATCTTACTAGATGCCCATATGAACCCAAAAATCTCAGACTTTGGCCTGGCTCGTACTTTTGGGGAAGATCAAATTCAAGCTAAAACAAAAAAACTGGTTGGAACATATGGTTACATGCCTCCAGAATATGCCGTACATGGTCATTACTCCGTGAAATCAGATGTCTTCAGCTTTGGTGTAATAGTACTGGAGATAATCAGTGGAAAAAAGAATAGAGGATTTTCTGACCCAGAACATTCTCTTAATCTACTTGGACATGCATGGAGACTCTGGACTGAAGACAGGCCATTGGAACTTATAGACAAACATTTACGCCAAAGATGCATTTTATCTGAAGTCTTAAGATGCATACATGTGGGTTTGTTATGCACACAACAAAAACCAGTAGACAGGCCAGACATGTCCTCTGTCATTCTTATGCTGAATGGTGAAAAATTATTGCCCCAGCCAAATCCTCCTGGATTTTATACTGGAAGGAGTTTACCTGAATCAATATCTTTAAATGAGATGTCCCTTACAATTTTTGAAGCTAGATAG 2439 0.3903 MKIVLFLSFFLFSYVRTCTSLDSLAVSQSIQDGQTLVSVDGTFEVGFFTPGNSASRYLGVWYRNLSPLTVVWVANRETPLQNNSGVLKLNEDGVLVLLNSTNSTVWSSKISKETVNNPIVQLLDSGNLVLKNGKDTKEDQILWQSFDYPCDTLLPGMKLGWNLVTGLDRFLTSWKSADDPARGEFSVHINIGGYPQLVFMKGSVIKSRIGSWNGLGFTGYPIQPLIGKQRFIFVVNAEEVYHQYEVLDSTFVSIYTLSPSGLLRSLAWTSKTSDQKVIETGLDSCDIYAMCGANSICNMNGNVPKCECLGGYVPNFPEQWNISFWAGGCVSRNNSTCKNRNSSTDGFWKYKQLKIPDTSSSWYSTTMNLEECHKSCLKNCSCTAYANLDVRNGGSGCLLWFHDLVDTRIFSQWGQDLYIRVPASEQDQVADNGHGYTQKKMVGITIGWIIFGFITCVSMLILRKRGKFCIRLFQWRQEYFRLRKDDMDLPTFDLSIIAKATNNFSSRNKLGEGGFGPVYKGTLIDGQEVAVKRHSKKSDQGLEEFKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDYFIFDETRRKLFAWLQRFHIIGGVARGLLYLHEDSRLRIIHRDLKTSNILLDAHMNPKISDFGLARTFGEDQIQAKTKKLVGTYGYMPPEYAVHGHYSVKSDVFSFGVIVLEIISGKKNRGFSDPEHSLNLLGHAWRLWTEDRPLELIDKHLRQRCILSEVLRCIHVGLLCTQQKPVDRPDMSSVILMLNGEKLLPQPNPPGFYTGRSLPESISLNEMSLTIFEAR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3668g00019 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Gabi3668g00019 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Gabi3668g00019 812 Pfam PAN-like domain 337 407 IPR003609 -
Gabi3668g00019 812 SMART ntp_6 342 421 IPR003609 -
Gabi3668g00019 812 Gene3D Phosphorylase Kinase; domain 1 479 579 - -
Gabi3668g00019 812 Gene3D - 15 146 IPR036426 -
Gabi3668g00019 812 ProSiteProfiles Bulb-type lectin domain profile. 21 143 IPR001480 -
Gabi3668g00019 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 146 - -
Gabi3668g00019 812 Gene3D Hepatocyte Growth Factor 339 416 - -
Gabi3668g00019 812 ProSiteProfiles PAN/Apple domain profile. 337 422 IPR003609 -
Gabi3668g00019 812 SMART blect_4 27 149 IPR001480 -
Gabi3668g00019 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 579 - -
Gabi3668g00019 812 CDD PAN_AP_plant 334 422 - -
Gabi3668g00019 812 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3668g00019 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 765 - -
Gabi3668g00019 812 SUPERFAMILY Protein kinase-like (PK-like) 489 795 IPR011009 -
Gabi3668g00019 812 PIRSF SRK 1 810 IPR024171 GO:0004674
Gabi3668g00019 812 ProSiteProfiles EGF-like domain profile. 281 318 IPR000742 -
Gabi3668g00019 812 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Gabi3668g00019 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 180 IPR036426 -
Gabi3668g00019 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 421 - -
Gabi3668g00019 812 Gene3D Transferase(Phosphotransferase) domain 1 580 781 - -
Gabi3668g00019 812 SMART serkin_6 504 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3668g00019 812 CDD B_lectin 27 149 IPR001480 -
Gabi3668g00019 812 Pfam Protein tyrosine and serine/threonine kinase 507 772 IPR001245 GO:0004672|GO:0006468
Gabi3668g00019 812 CDD STKc_IRAK 510 777 - -
Gabi3668g00019 812 Pfam D-mannose binding lectin 69 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3668g00019 Gabi-Chr3668 351994 359821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3668g00019 440 812 Receptor kinase-like Gene Family AT4G05200 49.876 3.14e-127 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi3668g00019 PK_Tyr_Ser-Thr 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3668g00019 - - aprc:113865090 1227.62