Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3668g00017 ATGGCAAGCTATGAGGGATTTGTTCTGTTCTCTCTCCTATTCTCCTTCATTCCCATGATCATTTCCCTGAGGAGTATCACTCCAGACATATCCATCCATTACAATGAGACCCTGGTTTCTGCAGCTGGAACTTTTGAAGCTGGATTCTTCAGCTTGAGGAATTCACAAAGCCTATACTTTTGTATATGGTACAAGAACTTAACACCTAGGACAATTGTATGGGTAGCCAACAGAGATACCCCACTTGATAATAACCCAACAGCAATTTTCAAAGTCACTGATGGAGGAAATCCAATTATACTTTATGGTTCTGGGACCATAGTCTGGTCCTCCAATGCTTCAATCACTGTACAGATGCCAGTTCTATTGCTCTTAGACACAGGAAACCTTGTTGTACAAAATGGAAGTAGCACTGGGAACATTGTGTGGCAAAGTTTTGATTATCCTGGTGACACTTTACTCCCAGGGATGATACTTCATCTTAATAGAGTTAGTGGTGTGTATAATTCTCTGACATCTTGGAAAAACACAGGAGATCCATCAAGAGGTGATTTTTCATACCACTTAGTTGGTCATGGTTTTCCTCAGCTAGTTATTTCGAAAGGATCAACATTATTATACAGACTAGGCTCTTGGAATGGGTTTTTCTTCAGTGGGATTCCTTGGGAAACACTTTATAGTTACTTTACTTTCTCTTTTGTGTTAACTGAGCAGGAAGTTCATTTTCACTATGAACCCTTAAATAGTTCAATCGTTTCAAGATACATGATCACACCAACAGGTGCTGTGCAACGTTTCCTGTGGTCATATCAGACAGAAACCTGGCAACTTTTCCTATCTGGCCCTGTGGATCAGTGTGATAATTATGCCTTTTGTGGTGCAAACTCTGAATGCAATGTTAATAACTCTCCACAATGTGAATGCCTCACAGGTTACACACCCAAATCTCCAGAAAAATGGAATTCATTAGATAGGACTGATGGGTGTGTTCGGAAGGTAAATTTGGATTGTGATAATAGAGATGGATTTCTTAAGTATACAGGAATGAAGTTGCCAGACACATCTTCCTCCTGGTTAGATAAGAACATGACTCTTCAAGAATGTGAGATACAATGCTTAAAAAACTGCAGTTGTATAGCCTATTCAAATTTAGATATTAGAGATGGTGGAAGTGGTTGCATGATTTGGTTTAATAACATCATGGACATGAGGAAAGAAAACTCTGAAGGGCAAGAGATTCACATAAGAGTGGCTGCTTCAGAATTAGATAATTCAAAGAATAACTCAAACAAGAAAAAGCTAGCAGGGATTCTGGGAGGAGTTGGGACACTCATCTTGGGCATCACAATAGCTGGATATGTCTTGTATCTGAAGAGGAAGAAACTTAGGAAGTCAGGTAAGGACACAGTAATAAACAAGGAGGATGATATTGAGAAATATGAGAAGGAAAACATTGACTTGCCAACGTTTGATTTTTCAACCATTTCTAATGCTACTGATCAGTTCTCCCCCAGTAACATATTGGGAGAAGGTGGATATGGACCAGTTTACAAGGGTGAACTAAATGGGAGAGAGATTGCTGTCAAGCGGCTTTCCTTGAAATCTGGACAAGGACCACAAGAATTCAAAAATGAAGTTTTGTTGATTGCCAATCTTCAGCATAGAAATCTTGTGAAGCTTCTCGGTTGTTGCATTCAGAGTGATGAAAGAATCCTAATCTATGAATACATGCCTAATAGAAGTTTGGACAAATTCATTTTTGATCACATAAGAAGCAAAGAATTGGATTGGAATAAACGTTTACATATCATAAGTGGGATTGCTCGAGGGCTTGTGTATCTTCATCAAGATTCTAGACTAAGGATCATCCACAGAGATCTAAAAACCAGTAATATTCTTCTAGATAATGATATGAACCCAAAAATATCAGACTTTGGATTGGCTAGAGCTTTTGGTGGTGATCATGCTGAGGCCAATACAATAAGAGTAGTGGGAACTCATGGCTATATGCCCCCTGAGTATGCAGTGTATGGATCTTTTTCGGTGAAGACTGATGTATTTAGCTTCGGTGTTATTGTTCTGGAGATGATTAGTGGGAGGAAGAACAGAGAATTTTTTGACACACAACATAATCTTAACCTTCTTGGATATGCATGGAGATTGTGGAGTGAGGACAGACCATTGGGGCTGATAGCAGATACCCTTAGTGATTCAGTTATTGAGGTTGAGGCATTAAGATGTATCCAGATAGGGTTGCTGTGTGTGCAAGAGAGACAAGATGATAGGCCAGACATGTCATCTGTTGTTCTAATGTTGAATGGTGAGAGAGCATTACCTAATCCAAGACAACCCGGGTTTTATCCACATGAAGTTGTCTCTTCCTCAAGTAAACATGAACTGTCTTCAACAAATGAAGTTTCCATTTCATTGTTACAGCCAAGATAG 2445 0.3922 MASYEGFVLFSLLFSFIPMIISLRSITPDISIHYNETLVSAAGTFEAGFFSLRNSQSLYFCIWYKNLTPRTIVWVANRDTPLDNNPTAIFKVTDGGNPIILYGSGTIVWSSNASITVQMPVLLLLDTGNLVVQNGSSTGNIVWQSFDYPGDTLLPGMILHLNRVSGVYNSLTSWKNTGDPSRGDFSYHLVGHGFPQLVISKGSTLLYRLGSWNGFFFSGIPWETLYSYFTFSFVLTEQEVHFHYEPLNSSIVSRYMITPTGAVQRFLWSYQTETWQLFLSGPVDQCDNYAFCGANSECNVNNSPQCECLTGYTPKSPEKWNSLDRTDGCVRKVNLDCDNRDGFLKYTGMKLPDTSSSWLDKNMTLQECEIQCLKNCSCIAYSNLDIRDGGSGCMIWFNNIMDMRKENSEGQEIHIRVAASELDNSKNNSNKKKLAGILGGVGTLILGITIAGYVLYLKRKKLRKSGKDTVINKEDDIEKYEKENIDLPTFDFSTISNATDQFSPSNILGEGGYGPVYKGELNGREIAVKRLSLKSGQGPQEFKNEVLLIANLQHRNLVKLLGCCIQSDERILIYEYMPNRSLDKFIFDHIRSKELDWNKRLHIISGIARGLVYLHQDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARAFGGDHAEANTIRVVGTHGYMPPEYAVYGSFSVKTDVFSFGVIVLEMISGRKNREFFDTQHNLNLLGYAWRLWSEDRPLGLIADTLSDSVIEVEALRCIQIGLLCVQERQDDRPDMSSVVLMLNGERALPNPRQPGFYPHEVVSSSSKHELSSTNEVSISLLQPR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3668g00017 814 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Gabi3668g00017 814 CDD STKc_IRAK 508 774 - -
Gabi3668g00017 814 SMART serkin_6 502 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3668g00017 814 PIRSF SRK 2 814 IPR024171 GO:0004674
Gabi3668g00017 814 Pfam D-mannose binding lectin 71 175 IPR001480 -
Gabi3668g00017 814 CDD B_lectin 35 149 IPR001480 -
Gabi3668g00017 814 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Gabi3668g00017 814 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Gabi3668g00017 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 576 - -
Gabi3668g00017 814 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Gabi3668g00017 814 Gene3D Hepatocyte Growth Factor 334 416 - -
Gabi3668g00017 814 Gene3D Transferase(Phosphotransferase) domain 1 577 780 - -
Gabi3668g00017 814 SMART blect_4 29 149 IPR001480 -
Gabi3668g00017 814 Gene3D - 22 146 IPR036426 -
Gabi3668g00017 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Gabi3668g00017 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Gabi3668g00017 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Gabi3668g00017 814 CDD EGF_CA 283 316 - -
Gabi3668g00017 814 Pfam Protein kinase domain 505 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3668g00017 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 762 - -
Gabi3668g00017 814 SMART ntp_6 338 417 IPR003609 -
Gabi3668g00017 814 SUPERFAMILY Protein kinase-like (PK-like) 485 772 IPR011009 -
Gabi3668g00017 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Gabi3668g00017 814 ProSiteProfiles Protein kinase domain profile. 502 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3668g00017 814 Pfam PAN-like domain 337 403 IPR003609 -
Gabi3668g00017 814 CDD PAN_AP_plant 333 418 - -
Gabi3668g00017 814 Gene3D Phosphorylase Kinase; domain 1 472 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3668g00017 Gabi-Chr3668 311413 314746 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3668g00017 435 814 Receptor kinase-like Gene Family AT4G23220 49.487 2.26e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi3668g00017 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3668g00017 - - gmx:106794307 1033.09