Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3662g00003 ATGGCAGGAACAGTTGGTGGGGGTGAGATATGGAAGGCCCACATGGCTATGGCGATGGTGCAGTTATTCAATGGAGGGTATCATGTAATAACCAAGTTGGCCCTTAATGTTGGGGTCAACCAAATCGTTTTCTGCGTCTTCCGTGATCTCCTTGCCCTCTCCATTCTCGCTCCCATCGCTTATTTCCGTGAAAAACGTACACGACCTCCAATAACCAAGCACCTCCTGCTGTCATTTTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTATTGCTGCTGCAATACAGCCAGCCACTCCAGTCTTTACATTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACCTGTTAAGATATGAAGGTCTGGCAAAGGTTGGAGGAACTCTTACCTGTGTTTTTGGTGCCATATTGATGGTTTTGTATCGTGGTCCGGCATTGATAGGATATACAGAAATGGACCTTGTATCACAAAGTGAAATAAGTGCCAGAGGTCAACCAGAACCTTCTGGATGGTTAATTAGCGGTTTACTGGATCTTGGATTAGACCATTTTCATCTCGGGGTTCTATGCTTCATAGGGAACTGCATGTGCATGGCTGCTTTTTTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCGAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTGTACTGATGATAACAACATCGTTCTTTGTGACCGATGAATCAACGGACTGGACTTTGACGCAATCTGAAACAATTGCTGTTATTTATGCTGGAATCATTGCATCTGCCCTTAATTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCGGCTATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCTTCTGCTCTCCTGTCCAGAATCTTTCTTGGAAGTCCAATTTACTTGGGAAGCATCATGGGGGGATCTTTAATCATTACTGGTCTGTATGCGGTTACTTGGGCATCTTTTAGAGAAAGACGAGCAGCTGCTGGAGTTATTCCATCTTGGGTCTCTGAATCACTTGTTCATGACAAGACTTCATACCAAAGACTTAGCATTTTCTCTGGCCCCCCTACCTTATCCCCAAAGCCTTCTGATTAA 1158 0.4344 MAGTVGGGEIWKAHMAMAMVQLFNGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAYFREKRTRPPITKHLLLSFFFLGLTGIFGNHLLFLIGLSYTNPTIAAAIQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTLTCVFGAILMVLYRGPALIGYTEMDLVSQSEISARGQPEPSGWLISGLLDLGLDHFHLGVLCFIGNCMCMAAFLSIQAPLLKKYPANLSVTAYSYFFGAVLMITTSFFVTDESTDWTLTQSETIAVIYAGIIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYLGSIMGGSLIITGLYAVTWASFRERRAAAGVIPSWVSESLVHDKTSYQRLSIFSGPPTLSPKPSD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3662g00003 385 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016020|GO:0022857
Gabi3662g00003 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 344 - -
Gabi3662g00003 385 Pfam EamA-like transporter family 16 138 IPR000620 GO:0016020
Gabi3662g00003 385 Pfam EamA-like transporter family 201 338 IPR000620 GO:0016020
Gabi3662g00003 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3662g00003 Gabi-Chr3662 28951 41502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3662g00003 9 272 Nodulin-like Gene Family AT3G45870 69.697 2.08e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3662g00003 - - gmx:100809051 667.537