Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3660g00050 ATGGAAGAACAGTATGAGATAATTAAAGATATAGGGTCAGGGAACTTTGGGGTAGCAAAGTTGGTAAGGGAGAAACGGAGTGGTGAGCTCTATGCTGTCAAGATCATTGAGAGAGGCCTAAAGATTGATGAGCATGTTCAAAGGGAGATTATAAATCATAGGTCCCTGAAACATCCCAATATCATTAGATTTAAAGAGGTGTTGTGTACTCCAACTCATTTAGCTATAGTCATGGAATATGCTGCAGGGGGAGAACTATTTGAAAGAATATGCAACGCTGGTAGATTTTGTGAGGATGAGGCAAGATATTTCTTCCGGCAATTGATTTCTGGAGTCAGCTATTGTCATTCAATGGACATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTTTAGATGGAAGCTTAGCACCCCAACTCAAAATATGTGACTTTGGTTACTCCAAGTCATCTGTTCTGCACTCCCAGCCTAAATCTACCGTGGGAACTCCAGCATATATTGCACCGGAAGTATTGTCAAGAAGAGAATATGATGGAAAGGTTGCTGATGTTTGGTCTTGTGGGGTAACCTTATATGTGATGCTAGTTGGTGGTTATCCTTTTGAAGATCCAGATGACCCACGAAACTTCAGAAAAACAATTCAGCGAATTCTTAGTGTCCACTATTCTATTCCAGACTACGTTCGTATCTCGAAAGATTGTAGACAACTTTTGTCTCGAATATTTGTGGCTAACCCCGAGAAGAGAATCCCCATCCCAGAAATTAAAGTGCACCCGTGGTTCCTTAATAACATGCCATTGCCAATGGAACTTATGGATGAAGGGGAAGGTAAGTTGCAAAATGATGTGAGTGATGTGGATGATTCATCTCAGAGCATTGAAGAAATACTGTCCATAATTCAAGAGGCTCGGAAACCAGGTGAGGGACCAAAAATTGGTGGACAGTTTGTTGGAGGAAGCATGGACCTTGATGAGATGGATTCAGATGCTGACTATGATGATATAGAAGCAAGTGGGGATTTTGTTTGTGCATTGTGA 1038 0.4114 MEEQYEIIKDIGSGNFGVAKLVREKRSGELYAVKIIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPTHLAIVMEYAAGGELFERICNAGRFCEDEARYFFRQLISGVSYCHSMDICHRDLKLENTLLDGSLAPQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRILSVHYSIPDYVRISKDCRQLLSRIFVANPEKRIPIPEIKVHPWFLNNMPLPMELMDEGEGKLQNDVSDVDDSSQSIEEILSIIQEARKPGEGPKIGGQFVGGSMDLDEMDSDADYDDIEASGDFVCAL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3660g00050 345 Gene3D Transferase(Phosphotransferase) domain 1 81 267 - -
Gabi3660g00050 345 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3660g00050 345 SUPERFAMILY Protein kinase-like (PK-like) 3 295 IPR011009 -
Gabi3660g00050 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Gabi3660g00050 345 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3660g00050 345 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Gabi3660g00050 345 PANTHER SERINE/THREONINE KINASE 3 276 - -
Gabi3660g00050 345 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3660g00050 345 CDD STKc_SnRK2 4 260 - -
Gabi3660g00050 345 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Gabi3660g00050 345 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Gabi3660g00050 345 FunFam Aurora kinase A 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3660g00050 Gabi-Chr3660 481711 485037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3660g00050 4 288 CBL-interacting serine-threonine protein kinases AT4G24400 41.497 1.67e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gabi3660g00050 Pkinase 6.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3660g00050 K14498 - gmx:100807981 598.971