Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3660g00049 ATGGAAGAACAGTATGAGATAATTAAAGATATAGGGTCAGGGAACTTTGGGGTAGCAAAGTTGGTAAGGGAGAAACGGAGTGGTGAGCTCTATGCTGTCAAGATCATTGAGAGAGGCCTAAAGATTGATGAGCATGTTCAAAGGGAGATTATAAATCATAGGTCCCTGAAACATCCCAATATCATTAGATTTAAAGAGGTGTTGTGTACTCCAACTCATTTAGCTATAGTCATGGAATATGCTGCAGGGGGAGAACTATTTGAAAGAATATGCAACGCTGGTAGATTTTGTGAGGATGAGGCAAGATATTTCTTCCGGCAATTGATTTCTGGAGTCAGCTATTGTCATTCAATGGACATTTGCCATAGAGATCTTAAGCTGGAAAACACACTTTTAGATGGAAGCTTAGCACCCCAACTCAAAATATGTGACTTTGGTTACTCCAAGTCATCTGTTCTGCACTCCCAGCCTAAATCTACCGTGGGAACTCCAGCATATATTGCACCGGAAGTATTGTCAAGAAGAGAATATGATGGAAAGCGAATTCTTAGTGTCCACTATTCTATTCCAGACTACGTTCGTATCTCGAAAGATTGTAGACAACTTTTGTCTCGAATATTTGTGGCTAACCCCGAGAAGAGAATCCCCATCCCAGAAATTAAAGTGCACCCGTGGTTCCTTAATAACATGCCATTGCCAATGGAACTTATGGATGAAGGGGAAGGTAAGTTGCAAAATGATGTGAGTGATGTGGATGATTCATCTCAGAGCATTGAAGAAATACTGTCCATAATTCAAGAGGCTCGGAAACCAGGTGAGGGACCAAAAATTGGTGGACAGTTTGTTGGAGGAAGCATGGACCTTGATGAGATGGATTCAGATGCTGACTATGATGATATAGAAGCAAGTGGGGATTTTGTTTGTGCATTGTGA 933 0.4116 MEEQYEIIKDIGSGNFGVAKLVREKRSGELYAVKIIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPTHLAIVMEYAAGGELFERICNAGRFCEDEARYFFRQLISGVSYCHSMDICHRDLKLENTLLDGSLAPQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKRILSVHYSIPDYVRISKDCRQLLSRIFVANPEKRIPIPEIKVHPWFLNNMPLPMELMDEGEGKLQNDVSDVDDSSQSIEEILSIIQEARKPGEGPKIGGQFVGGSMDLDEMDSDADYDDIEASGDFVCAL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3660g00049 310 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Gabi3660g00049 310 Gene3D Transferase(Phosphotransferase) domain 1 81 180 - -
Gabi3660g00049 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Gabi3660g00049 310 SUPERFAMILY Protein kinase-like (PK-like) 3 238 IPR011009 -
Gabi3660g00049 310 Gene3D Transferase(Phosphotransferase) domain 1 181 232 - -
Gabi3660g00049 310 Pfam Protein kinase domain 5 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3660g00049 310 ProSiteProfiles Protein kinase domain profile. 5 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3660g00049 310 SMART serkin_6 5 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3660g00049 310 FunFam Aurora kinase A 1 84 - -
Gabi3660g00049 310 PANTHER SERINE/THREONINE KINASE 183 246 - -
Gabi3660g00049 310 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3660g00049 Gabi-Chr3660 481711 485037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3660g00049 4 253 CBL-interacting serine-threonine protein kinases AT4G24400 36.207 2.09e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gabi3660g00049 Pkinase 1.2e-49 CL0016