Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3660g00033 ATGGCTATTGCACCATTTGGTAGTGCATCAGCTACTCAATGGGGAATTCGTCCTCAGCTTATCACGAGATCGAGTGCAATTGGCAAGATTGCATCATCCTGCCACAATTTTACAAGCAGGGTAAGCTTTATGGCTGCCCCAAGTTCAAGCTTTTTTTCTCGGGAATCCTTGCGTGGACTAATTGACATAGGTTCATCTCAAACTTTGCATCATCGCAAGGGATCAAGATTGATAGTTAGAGCAGATTCAGATTACTATTCTGTCCTTGGGGTGTCTAGAAATTCTACTAAATCTGAAATTAAGAGTGCTTATCGGAAACTCGCCCGAAATTATCATCCGGATGTGAATAAGGAACCTGGTGCAGAACAGAAGTTTAAAGATATTAGTAATGCATATGAGGTCTTATCAGATGATGAGAAACGACCCATATATGACAGATATGGAGAGGATGGGCTTAAAGGTTCAGGAATGGGAACGGGGGATTTCAGTAATGCTTTTGATCTGTTCGAGACACTATTTGAGGGCATGAATGGTGGCATGAACACCAGAGGTTCTTGGAATGGAGCAGCTGATGGTGAGGATGAGTATTACAGTTATGTTTTGAACTTTAAAGAAGCTGTTTTTGGAGTGGAAAAGGATATAGAGATTAAGAGATTAGAGAGCTGCGGAACTTGCAAGGGTTCAGGGACTAAACCAGGGACTAAATCATCCAAATGCAGCACTTGTCGTGGTCAGGGTCGTGTTGTCTCGTCAACAAGGACTCCATTAGGTATCTTTCAGCAGACAATGACATGCTCTTCTTGCAATGGTACTGGAGAAATTTCAACACCTTGCAGTACATGTTCTGGGGATGGTCGAGTGAGGAAAACAAAGCAGATAACTCTAAAGATTCCAGCTGGTGTGGATTCTGGTAGCCGTTTAAGGGTCCAAAATGAAGGTAATGCTGGAAGGCGCGGGGGTTCTCCTGGTGACCTCTTTGTTGTTCTTGAAGTTATCCCAGATCCTGTGCTTAAACGAGATGACACTAACATTTTATACTCATGTAAGGTGTCTTATATTGATGCAATCTTGGGGACTAAAATTAAGGTTCCAACTGTAGACGGCATGGTGGATTTGAAAATCCCACCTGGGACTCAACCAGGCTCAACACTTGTTATGGCTAAGAAAGGTGTCCCCCTGCTGAATAAAAAGAATATGAGGGGTGATCAATTGGTTCGAGTGCAAGTTGAAATCCCTAAAAGACTGAGCAGCGATGAGAAAAAACTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGAAGGCTGCCACCATTACGAGATAA 1323 0.4278 MAIAPFGSASATQWGIRPQLITRSSAIGKIASSCHNFTSRVSFMAAPSSSFFSRESLRGLIDIGSSQTLHHRKGSRLIVRADSDYYSVLGVSRNSTKSEIKSAYRKLARNYHPDVNKEPGAEQKFKDISNAYEVLSDDEKRPIYDRYGEDGLKGSGMGTGDFSNAFDLFETLFEGMNGGMNTRGSWNGAADGEDEYYSYVLNFKEAVFGVEKDIEIKRLESCGTCKGSGTKPGTKSSKCSTCRGQGRVVSSTRTPLGIFQQTMTCSSCNGTGEISTPCSTCSGDGRVRKTKQITLKIPAGVDSGSRLRVQNEGNAGRRGGSPGDLFVVLEVIPDPVLKRDDTNILYSCKVSYIDAILGTKIKVPTVDGMVDLKIPPGTQPGSTLVMAKKGVPLLNKKNMRGDQLVRVQVEIPKRLSSDEKKLIEELADLSKGKKAATITR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3660g00033 440 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Gabi3660g00033 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 337 423 IPR008971 GO:0006457|GO:0051082
Gabi3660g00033 440 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 42 435 - -
Gabi3660g00033 440 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 209 289 IPR036410 -
Gabi3660g00033 440 FunFam Chaperone protein dnaJ 1, mitochondrial 332 439 - -
Gabi3660g00033 440 NCBIfam molecular chaperone DnaJ 84 428 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gabi3660g00033 440 CDD DnaJ 84 137 IPR001623 -
Gabi3660g00033 440 CDD DnaJ_zf 222 285 IPR001305 GO:0031072|GO:0051082
Gabi3660g00033 440 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Gabi3660g00033 440 SMART dnaj_3 83 140 IPR001623 -
Gabi3660g00033 440 Gene3D - 222 285 - -
Gabi3660g00033 440 Gene3D - 192 327 - -
Gabi3660g00033 440 Gene3D DnaJ domain 81 185 IPR036869 -
Gabi3660g00033 440 ProSiteProfiles Zinc finger CR-type profile. 209 290 IPR001305 GO:0031072|GO:0051082
Gabi3660g00033 440 CDD DnaJ_C 193 415 - -
Gabi3660g00033 440 SUPERFAMILY Chaperone J-domain 81 180 IPR036869 -
Gabi3660g00033 440 Pfam DnaJ central domain 222 285 IPR001305 GO:0031072|GO:0051082
Gabi3660g00033 440 FunFam Chaperone protein dnaJ A6 chloroplastic 81 185 - -
Gabi3660g00033 440 FunFam Putative Mitochondrial DnaJ chaperone 278 327 - -
Gabi3660g00033 440 Gene3D - 332 440 - -
Gabi3660g00033 440 PRINTS DnaJ domain signature 140 159 IPR001623 -
Gabi3660g00033 440 PRINTS DnaJ domain signature 104 119 IPR001623 -
Gabi3660g00033 440 PRINTS DnaJ domain signature 120 140 IPR001623 -
Gabi3660g00033 440 PRINTS DnaJ domain signature 86 104 IPR001623 -
Gabi3660g00033 440 Pfam DnaJ domain 84 145 IPR001623 -
Gabi3660g00033 440 Pfam DnaJ C terminal domain 199 412 IPR002939 -
Gabi3660g00033 440 FunFam Molecular chaperone DnaJ 214 290 - -
Gabi3660g00033 440 Hamap Chaperone protein DnaJ [dnaJ]. 81 435 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gabi3660g00033 440 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 344 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3660g00033 Gabi-Chr3660 386459 390454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3660g00033 85 147 C2H2 Transcription Factor Family AT1G74250 42.029 8.89e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3660g00033 K03686 - gmx:100786143 747.658