Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3660g00024 ATGTGTGGAATCCTTGCAGTGTTGGGTTGCGTCGATAACTCTCAGGGAAAGCGCGCTCGCATTATCGAGTTGTCTCGCAGGTTGCGGCATAGAGGTCCTGATTGGAGTGGCTTGCATTGCCATGGAGATTGTTACCTTGCTCATCAACGGCTTGCTATTGTGGACCCTACTTCAGGGGATCAACCTCTCTACAACGAAGACAGGACTGTTATTGTCACTGTAAATGGGGAGATATACAACCATAAGCAATTGAGACAGCAACTGAAGTCCCATCAATTTAGAACTGGTAGTGATTGTGAAGTGATTGCTCATCTTGTAAAACATGGAGAAGACTTTGTTGATATGCTGGATGGGATATTCGCCTTTGTCCTTCTTGACACTCGAGATAATAGTTTTATTGCTGCTCGTGATGCTATTGGAGTTAACTCTCTTTACTTGGGCTGGGGTCATGATGGATCAACATGGTTTGCGTCTGAAATGAAAGCTCTGAGCGATGATTGTGAGAGATTCATATCTTTTCCTCCGGGGCATATATATTCCAGCAAACAGGGAGGATTGAGAAGGTGGTACAATCCACCATGGTACTCAGAGCATATTCCATCAACACCCTATGATCCAATGATGTTGTGTGAGGCTTTTGAGAGGGCTGTATTAAAGAGAATGATGACTGATGTGCCTTTTGGAGTTCTTTTGTCTGGAGGACTTGACTCATCACTTGTTGCTGCTGTGGCCAATCGTTATTTGGCTGAATCTGCAGCTGCTCATCAGTGGGGATCACAGTTACATACTTTCTGCATTGGTTTGGAGGGCTCTCCGGATTTGAAAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGTCACTACGAACTTCATTTCACGGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTATCATATTGAAACATATGATGTAACGACTGTCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATTAAAGCCCTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAAGAGCTTCACGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGATTGCCTGAGAGCCAATAAATCAACTGCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACATAGCCATGAGTATGGATCCGGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAGTGGGTATTACGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGTGTCGGGTACAGCTGGATTGATGGCTTGAAGGATCATACTAACAAACAAGTCACAGATGCAATGCTGATGCAAGCCAACTTCATTTACCCTGAAAACACTCCTACTACAAAAGAGGCATACCACTACAGGACAATTTTTGAGAAGTTCTTCCCAAAGAATGCTGCTAGGTCAACAGTTCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAGTGGGATGCAGCATGGTCAAAAAATCTTGACCCTTCTGGTCGTGCTGCGATTGGTGTTCATGCAGCTGCATATGAGGATGAAGTTGATGTGAAAATAGCCGAGGCTAAAAACGGATCCATTTAA 1710 0.4316 MCGILAVLGCVDNSQGKRARIIELSRRLRHRGPDWSGLHCHGDCYLAHQRLAIVDPTSGDQPLYNEDRTVIVTVNGEIYNHKQLRQQLKSHQFRTGSDCEVIAHLVKHGEDFVDMLDGIFAFVLLDTRDNSFIAARDAIGVNSLYLGWGHDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWYSEHIPSTPYDPMMLCEAFERAVLKRMMTDVPFGVLLSGGLDSSLVAAVANRYLAESAAAHQWGSQLHTFCIGLEGSPDLKAAKEVADYLGTRHYELHFTVQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFINIAMSMDPEWKMIRPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHTNKQVTDAMLMQANFIYPENTPTTKEAYHYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAAIGVHAAAYEDEVDVKIAEAKNGSI 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3660g00024 569 PANTHER ASPARAGINE SYNTHETASE 1 554 - -
Gabi3660g00024 569 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 184 IPR017932 -
Gabi3660g00024 569 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 191 IPR029055 -
Gabi3660g00024 569 PIRSF Asn_synthetase_glu-h 356 515 IPR006426 GO:0004066|GO:0006529
Gabi3660g00024 569 PIRSF Asn_synthetase_glu-h 1 359 IPR006426 GO:0004066|GO:0006529
Gabi3660g00024 569 CDD Asn_Synthase_B_C 211 455 IPR001962 GO:0004066|GO:0006529
Gabi3660g00024 569 Pfam Asparagine synthase 211 510 IPR001962 GO:0004066|GO:0006529
Gabi3660g00024 569 Pfam Glutamine amidotransferase domain 48 164 IPR017932 -
Gabi3660g00024 569 CDD AsnB 2 191 IPR033738 -
Gabi3660g00024 569 Gene3D HUPs 194 513 IPR014729 -
Gabi3660g00024 569 FunFam Asparagine synthetase [glutamine-hydrolyzing] 194 513 - -
Gabi3660g00024 569 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 194 IPR029055 -
Gabi3660g00024 569 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 191 - -
Gabi3660g00024 569 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 206 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3660g00024 Gabi-Chr3660 251143 257147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3660g00024 42 163 PRT Gene Family AT4G38880 29.787 6.43e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3660g00024 K01953 - gmx:732660 1068.14