LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3660g00024	ATGTGTGGAATCCTTGCAGTGTTGGGTTGCGTCGATAACTCTCAGGGAAAGCGCGCTCGCATTATCGAGTTGTCTCGCAGGTTGCGGCATAGAGGTCCTGATTGGAGTGGCTTGCATTGCCATGGAGATTGTTACCTTGCTCATCAACGGCTTGCTATTGTGGACCCTACTTCAGGGGATCAACCTCTCTACAACGAAGACAGGACTGTTATTGTCACTGTAAATGGGGAGATATACAACCATAAGCAATTGAGACAGCAACTGAAGTCCCATCAATTTAGAACTGGTAGTGATTGTGAAGTGATTGCTCATCTTGTAAAACATGGAGAAGACTTTGTTGATATGCTGGATGGGATATTCGCCTTTGTCCTTCTTGACACTCGAGATAATAGTTTTATTGCTGCTCGTGATGCTATTGGAGTTAACTCTCTTTACTTGGGCTGGGGTCATGATGGATCAACATGGTTTGCGTCTGAAATGAAAGCTCTGAGCGATGATTGTGAGAGATTCATATCTTTTCCTCCGGGGCATATATATTCCAGCAAACAGGGAGGATTGAGAAGGTGGTACAATCCACCATGGTACTCAGAGCATATTCCATCAACACCCTATGATCCAATGATGTTGTGTGAGGCTTTTGAGAGGGCTGTATTAAAGAGAATGATGACTGATGTGCCTTTTGGAGTTCTTTTGTCTGGAGGACTTGACTCATCACTTGTTGCTGCTGTGGCCAATCGTTATTTGGCTGAATCTGCAGCTGCTCATCAGTGGGGATCACAGTTACATACTTTCTGCATTGGTTTGGAGGGCTCTCCGGATTTGAAAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGTCACTACGAACTTCATTTCACGGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTATCATATTGAAACATATGATGTAACGACTGTCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATTAAAGCCCTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAAGAGCTTCACGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGATTGCCTGAGAGCCAATAAATCAACTGCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACATAGCCATGAGTATGGATCCGGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAGTGGGTATTACGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGTGTCGGGTACAGCTGGATTGATGGCTTGAAGGATCATACTAACAAACAAGTCACAGATGCAATGCTGATGCAAGCCAACTTCATTTACCCTGAAAACACTCCTACTACAAAAGAGGCATACCACTACAGGACAATTTTTGAGAAGTTCTTCCCAAAGAATGCTGCTAGGTCAACAGTTCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAGTGGGATGCAGCATGGTCAAAAAATCTTGACCCTTCTGGTCGTGCTGCGATTGGTGTTCATGCAGCTGCATATGAGGATGAAGTTGATGTGAAAATAGCCGAGGCTAAAAACGGATCCATTTAA	1710	0.4316	MCGILAVLGCVDNSQGKRARIIELSRRLRHRGPDWSGLHCHGDCYLAHQRLAIVDPTSGDQPLYNEDRTVIVTVNGEIYNHKQLRQQLKSHQFRTGSDCEVIAHLVKHGEDFVDMLDGIFAFVLLDTRDNSFIAARDAIGVNSLYLGWGHDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWYSEHIPSTPYDPMMLCEAFERAVLKRMMTDVPFGVLLSGGLDSSLVAAVANRYLAESAAAHQWGSQLHTFCIGLEGSPDLKAAKEVADYLGTRHYELHFTVQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFINIAMSMDPEWKMIRPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHTNKQVTDAMLMQANFIYPENTPTTKEAYHYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAAIGVHAAAYEDEVDVKIAEAKNGSI	569

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3660g00024	569	PANTHER	ASPARAGINE SYNTHETASE	1	554	-	-
	Gabi3660g00024	569	ProSiteProfiles	Glutamine amidotransferase type 2 domain profile.	2	184	IPR017932	-
	Gabi3660g00024	569	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	3	191	IPR029055	-
	Gabi3660g00024	569	PIRSF	Asn_synthetase_glu-h	356	515	IPR006426	GO:0004066\|GO:0006529
	Gabi3660g00024	569	PIRSF	Asn_synthetase_glu-h	1	359	IPR006426	GO:0004066\|GO:0006529
	Gabi3660g00024	569	CDD	Asn_Synthase_B_C	211	455	IPR001962	GO:0004066\|GO:0006529
	Gabi3660g00024	569	Pfam	Asparagine synthase	211	510	IPR001962	GO:0004066\|GO:0006529
	Gabi3660g00024	569	Pfam	Glutamine amidotransferase domain	48	164	IPR017932	-
	Gabi3660g00024	569	CDD	AsnB	2	191	IPR033738	-
	Gabi3660g00024	569	Gene3D	HUPs	194	513	IPR014729	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi3660g00024	Gabi-Chr3660	251143	257147	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3660g00024	42	163	PRT Gene Family	AT4G38880	29.787	6.43e-07	50.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3660g00024	K01953		-	gmx:732660	1068.14

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