Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3660g00022 ATGTGTGGAATCCTTGCAGTGTTGGGTTGCGTCGATAACTCTCAGGGAAAGCGCGCTCGCATTATCGAGTTGTCTCGCAGGTTGCGGCATAGAGGTCCTGATTGGAGTGGCTTGCATTGCCATGGAGATTGTTACCTTGCTCATCAACGGCTTGCTATTGTGGACCCTACTTCAGGGGATCAACCTCTCTACAACGAAGACAGGACTGTTATTGTCACTGTAAATGGGGAGATATACAACCATAAGCAATTGAGACAGCAACTGAAGTCCCATCAATTTAGAACTGGTAGTGATTGTGAAGTGATTGCTCATCTTTATGAAGAACATGGAGAAGACTTTGTTGATATGCTGGATGGGATATTCGCCTTTGTCCTTCTTGACACTCGAGATAATAGTTTTATTGCTGCTCGTGATGCTATTGGAGTTAACTCTCTTTACTTGGGCTGGGGTCATGATGGATCAACATGGTTTGCGTCTGAAATGAAAGCTCTGAGCGATGATTGTGAGAGATTCATATCTTTTCCTCCGGGGCATATATATTCCAGCAAACAGGGAGGATTGAGAAGGTGGTACAATCCACCATGGTACTCAGAGCATATTCCATCAACACCCTATGATCCAATGATGTTGTGTGAGGCTTTTGAGAGGGCTGTATTAAAGAGAATGATGACTGATGTGCCTTTTGGAGTTCTTTTGTCTGGAGGACTTGACTCATCACTTGTTGCTGCTGTGGCCAATCGTTATTTGGCTGAATCTGCAGCTGCTCATCAGTGGGGATCACAGTTACATACTTTCTGCATTGGTTTGGAGGGCTCTCCGGATTTGAAAGCTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGTCACTACGAACTTCATTTCACGGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTATCATATTGAAACATATGATGTAACGACTGTCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATTAAAGCCCTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAAGAGCTTCACGAAGAAACATGTCGAAAAATTAAAGCTCTTCATCTTTATGATTGCCTGAGAGCCAATAAATCAACTGCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACATAGCCATGAGTATGGATCCGGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAGTGGGTATTACGCAATGCATTTGATGATGATAAGAATCCATATTTACCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGTGTCGGGTACAGCTGGATTGATGGCTTGAAGGATCATACTAACAAACAAGTCACAGATGCAATGCTGATGCAAGCCAACTTCATTTACCCTGAAAACACTCCTACTACAAAAGAGGCATACCACTACAGGACAATTTTTGAGAAGTTCTTCCCAAAGAATGCTGCTAGGTCAACAGTTCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAGTGGGATGCAGCATGGTCAAAAAATCTTGACCCTTCTGGTCGTGCTGCGATTGGTGTTCATGCAGCTGCATATGAGGATGAACGAAGCAGCATTTGGAATTCCAAACCAAGCCAGATATTCACTCTATGA 1719 0.4322 MCGILAVLGCVDNSQGKRARIIELSRRLRHRGPDWSGLHCHGDCYLAHQRLAIVDPTSGDQPLYNEDRTVIVTVNGEIYNHKQLRQQLKSHQFRTGSDCEVIAHLYEEHGEDFVDMLDGIFAFVLLDTRDNSFIAARDAIGVNSLYLGWGHDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWYSEHIPSTPYDPMMLCEAFERAVLKRMMTDVPFGVLLSGGLDSSLVAAVANRYLAESAAAHQWGSQLHTFCIGLEGSPDLKAAKEVADYLGTRHYELHFTVQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKALGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHEETCRKIKALHLYDCLRANKSTAAWGVEARVPFLDKEFINIAMSMDPEWKMIRPDLGRIEKWVLRNAFDDDKNPYLPKHILYRQKEQFSDGVGYSWIDGLKDHTNKQVTDAMLMQANFIYPENTPTTKEAYHYRTIFEKFFPKNAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAAIGVHAAAYEDERSSIWNSKPSQIFTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3660g00022 572 Pfam Asparagine synthase 212 511 IPR001962 GO:0004066|GO:0006529
Gabi3660g00022 572 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 192 IPR029055 -
Gabi3660g00022 572 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Gabi3660g00022 572 Gene3D HUPs 195 514 IPR014729 -
Gabi3660g00022 572 CDD Asn_Synthase_B_C 212 456 IPR001962 GO:0004066|GO:0006529
Gabi3660g00022 572 PANTHER ASPARAGINE SYNTHETASE 1 555 - -
Gabi3660g00022 572 FunFam Asparagine synthetase [glutamine-hydrolyzing] 195 514 - -
Gabi3660g00022 572 FunFam Asparagine synthetase [glutamine-hydrolyzing] 2 192 - -
Gabi3660g00022 572 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Gabi3660g00022 572 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Gabi3660g00022 572 CDD AsnB 2 192 IPR033738 -
Gabi3660g00022 572 PIRSF Asn_synthetase_glu-h 357 516 IPR006426 GO:0004066|GO:0006529
Gabi3660g00022 572 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Gabi3660g00022 572 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 207 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3660g00022 Gabi-Chr3660 249796 257147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3660g00022 42 164 PRT Gene Family AT4G38880 29.787 2.50e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3660g00022 K01953 - gmx:732660 1066.99