Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3659g00021 ATGCATCTTGAAGGTAACCCTCAAAAGGACAAGGAAGCTGTTAGCAAAGAAGGGAAGGATATGGAAATTGAAGGGACTCGTGCAAAGGAGGAAACCCTACCACCTGGATTTAGATTTCACCCTACTGATGAAGAATTGATAACTTACTATCTCATAAACAAGATATCAGATTCTAGTTTTGCATGCAAAGCAATAGCTGATGTAGATCTCAACAAATGCGAACCATGGGAGCTGCCAGGGAAGGCGAAGATGGGACAAAAAGAATGGTACTTCTTCAGTCTTAGAGATCGTAAATACCCTACGGGTGTGAGAACCAATCGAGCAACGAACACTGGGTACTGGAAAACCACAGGGAAAGACAAGGAGATCTTCAACAGTGTCACATCGGAAATGGTTGGTATGAAGAAGACTTTGGTTTTCTATAAGGGCAGGGCTCCTAGAGGAGAAAAAACCAACTGGGTCATGCATGAATACCGCATTCACTCAAAATCCAGCTTCAGAACCAACAAGCAGGATGAATGGGTGGTATGCAGGGTATTCCGTAAGAGTGCTGGTGCAAAAAAGTACCCTTCTTCTAACCATACAAGAGCAGTGAATCCTTATAGCCTAGAAGTTGGTACTAGTATTATGCCACCACCAATGATGCAGCTAGGAGATCCTGCTACTCATTTCCTTTATGGAAGGAACTACATGAGCAGTGCAGAGTTAGCTGAAGTTACTAGGGTTTTAAGAGGTGGTGGATCCACCAGTAGTGTTAACCTACCAATGCAGTCCCATTTGAACTACCCAGTATCAGCACCAGGAGGAGGATTAGGATTCACCATTTCAGGGCTTAATTTGAATCTGGGTGGAGGAGGAGGATCAGTTGCTACAACACAACCCATTTTGAGGCCAATGCCACAGTCACAGCCATCTCATCATCATCCTGCTCACACAATGTCTCAAGTTGTGCATGATTTCAGTTCCAACTTGATGACAGCTAGTACTCTTGCTGCTGAGAATGTAGGGTATGGTGCTGCAATGAGCAATAATGCAAATCCTCACAGCAATAGGTTTATGGGCATGGACAATTGCATGGATCTAGATAGCTACTGGCCTTCTTACTGA 1107 0.4408 MHLEGNPQKDKEAVSKEGKDMEIEGTRAKEETLPPGFRFHPTDEELITYYLINKISDSSFACKAIADVDLNKCEPWELPGKAKMGQKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSEMVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSFRTNKQDEWVVCRVFRKSAGAKKYPSSNHTRAVNPYSLEVGTSIMPPPMMQLGDPATHFLYGRNYMSSAELAEVTRVLRGGGSTSSVNLPMQSHLNYPVSAPGGGLGFTISGLNLNLGGGGGSVATTQPILRPMPQSQPSHHHPAHTMSQVVHDFSSNLMTASTLAAENVGYGAAMSNNANPHSNRFMGMDNCMDLDSYWPSY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3659g00021 368 FunFam NAC domain-containing protein 100-like 42 186 - -
Gabi3659g00021 368 ProSiteProfiles NAC domain profile. 33 182 IPR003441 GO:0003677|GO:0006355
Gabi3659g00021 368 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 30 300 - -
Gabi3659g00021 368 SUPERFAMILY NAC domain 28 182 IPR036093 GO:0003677|GO:0006355
Gabi3659g00021 368 MobiDBLite consensus disorder prediction 1 25 - -
Gabi3659g00021 368 Gene3D NAC domain 42 186 IPR036093 GO:0003677|GO:0006355
Gabi3659g00021 368 Pfam No apical meristem (NAM) protein 34 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3659g00021 Gabi-Chr3659 172748 176079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3659g00021 27 368 NAC Transcription Factor Family AT2G24430 51.676 6.40e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi3659g00021 NAM 7.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3659g00021 - - gmx:100804931 565.074