Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3659g00016 | ATGGAACCTAAATGGGGCGGCGTTCTGGCGGCGCCGTCGATTTTCTCCAGCTTCGACGACTTGAAGTGGATCGCATCGGAGTTCGATCACGAGGAGTTCATGAAGCGCGTGACAGAAGTCGAAATAGCTAATGGATCGGCGAACGACGACGACGTGAAACCGTGCAAGATGGATCCGTTCATCAACGGCGGCGCATGCTCCGGCCAACTCAACGGCGCCGCCGTTGCTTCTTTCCCGAACCTGGATGCGGTGACTGCATTTTCAACTTGTGGTGAACTAACAGATAATACCATCGTCAGCTCGCAGAACCTCACTCCCAGGCATTCCCCCATTTCTCCAACTATTGATACTCAGTCATCCATTTGTGGTACTGTTGGGAGCCCGGTTTCTGCCAATAAACCAAATGGCAGAGAGAATCAAGGAAAAGTAACCACTACAAGTGGTTCCTCACGTGAGCCATCTGATGAGGATTGTGAACAGAGCACAAACCCTTGTGACATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCAAGGAGATCCAGAAGAAGAAAACAAGCGCATTTGGCTGACTTGGAGTTGCAGGTTGAACAGATGAGGCTGGAAAATGCAACCCTATACAAACAGCTTACAGATGCTAGCCAACAATTTCGTGATGCTGATACGAATAACAGAGTGTTAAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAGTTAGCCGAGGATATGGTCACTAGGGGCTCTTTCAGCACCCTTAACAACCAAATTTTCCAGAATCAGAGTCAATTGAGCACTCAACCACAACTCAACACGAGTAATCAGCGATGCATGGCACATGTCTCGCCAACCATCACTGTCCCTGGGAATGATGCCTCATTTGGTGGACAGAATTCATCTCTTGGGCTTGGAAACTTGGAAACGTGGACAGAATTCAGTGATTTCAACAATGGAGTCATAAGTGATGCTGTGAGCTCTGTGACTAATGAAATATGGCCATAA | 1008 | 0.4802 | MEPKWGGVLAAPSIFSSFDDLKWIASEFDHEEFMKRVTEVEIANGSANDDDVKPCKMDPFINGGACSGQLNGAAVASFPNLDAVTAFSTCGELTDNTIVSSQNLTPRHSPISPTIDTQSSICGTVGSPVSANKPNGRENQGKVTTTSGSSREPSDEDCEQSTNPCDMKRLRRKVSNRESARRSRRRKQAHLADLELQVEQMRLENATLYKQLTDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVTRGSFSTLNNQIFQNQSQLSTQPQLNTSNQRCMAHVSPTITVPGNDASFGGQNSSLGLGNLETWTEFSDFNNGVISDAVSSVTNEIWP | 335 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3659g00016 | 335 | SMART | brlzneu | 164 | 228 | IPR004827 | GO:0003700|GO:0006355 | |
Gabi3659g00016 | 335 | Coils | Coil | 226 | 246 | - | - | |
Gabi3659g00016 | 335 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 166 | 229 | IPR004827 | GO:0003700|GO:0006355 | |
Gabi3659g00016 | 335 | MobiDBLite | consensus disorder prediction | 101 | 151 | - | - | |
Gabi3659g00016 | 335 | Coils | Coil | 177 | 218 | - | - | |
Gabi3659g00016 | 335 | Pfam | bZIP transcription factor | 167 | 214 | IPR004827 | GO:0003700|GO:0006355 | |
Gabi3659g00016 | 335 | MobiDBLite | consensus disorder prediction | 101 | 165 | - | - | |
Gabi3659g00016 | 335 | CDD | bZIP_plant_GBF1 | 169 | 220 | IPR045314 | GO:0003700|GO:0006355 | |
Gabi3659g00016 | 335 | Gene3D | - | 167 | 223 | - | - | |
Gabi3659g00016 | 335 | PANTHER | BASIC LEUCINE ZIPPER 63 | 89 | 294 | - | - | |
Gabi3659g00016 | 335 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 171 | 186 | IPR004827 | GO:0003700|GO:0006355 | |
Gabi3659g00016 | 335 | FunFam | BZIP transcription factor | 166 | 217 | - | - | |
Gabi3659g00016 | 335 | SUPERFAMILY | Leucine zipper domain | 168 | 218 | IPR046347 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3659g00016 | Gabi-Chr3659 | 123511 | 129024 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3659g00016 | 79 | 335 | bZIP Transcription Factor Family | AT5G24800 | 47.794 | 3.27e-57 | 185 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gabi3659g00016 | bZIP_1 | 1.8e-10 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3659g00016 | K25784 | - | gmx:778193 | 356.681 |