Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3659g00016 ATGGAACCTAAATGGGGCGGCGTTCTGGCGGCGCCGTCGATTTTCTCCAGCTTCGACGACTTGAAGTGGATCGCATCGGAGTTCGATCACGAGGAGTTCATGAAGCGCGTGACAGAAGTCGAAATAGCTAATGGATCGGCGAACGACGACGACGTGAAACCGTGCAAGATGGATCCGTTCATCAACGGCGGCGCATGCTCCGGCCAACTCAACGGCGCCGCCGTTGCTTCTTTCCCGAACCTGGATGCGGTGACTGCATTTTCAACTTGTGGTGAACTAACAGATAATACCATCGTCAGCTCGCAGAACCTCACTCCCAGGCATTCCCCCATTTCTCCAACTATTGATACTCAGTCATCCATTTGTGGTACTGTTGGGAGCCCGGTTTCTGCCAATAAACCAAATGGCAGAGAGAATCAAGGAAAAGTAACCACTACAAGTGGTTCCTCACGTGAGCCATCTGATGAGGATTGTGAACAGAGCACAAACCCTTGTGACATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCAAGGAGATCCAGAAGAAGAAAACAAGCGCATTTGGCTGACTTGGAGTTGCAGGTTGAACAGATGAGGCTGGAAAATGCAACCCTATACAAACAGCTTACAGATGCTAGCCAACAATTTCGTGATGCTGATACGAATAACAGAGTGTTAAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAGTTAGCCGAGGATATGGTCACTAGGGGCTCTTTCAGCACCCTTAACAACCAAATTTTCCAGAATCAGAGTCAATTGAGCACTCAACCACAACTCAACACGAGTAATCAGCGATGCATGGCACATGTCTCGCCAACCATCACTGTCCCTGGGAATGATGCCTCATTTGGTGGACAGAATTCATCTCTTGGGCTTGGAAACTTGGAAACGTGGACAGAATTCAGTGATTTCAACAATGGAGTCATAAGTGATGCTGTGAGCTCTGTGACTAATGAAATATGGCCATAA 1008 0.4802 MEPKWGGVLAAPSIFSSFDDLKWIASEFDHEEFMKRVTEVEIANGSANDDDVKPCKMDPFINGGACSGQLNGAAVASFPNLDAVTAFSTCGELTDNTIVSSQNLTPRHSPISPTIDTQSSICGTVGSPVSANKPNGRENQGKVTTTSGSSREPSDEDCEQSTNPCDMKRLRRKVSNRESARRSRRRKQAHLADLELQVEQMRLENATLYKQLTDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVTRGSFSTLNNQIFQNQSQLSTQPQLNTSNQRCMAHVSPTITVPGNDASFGGQNSSLGLGNLETWTEFSDFNNGVISDAVSSVTNEIWP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3659g00016 335 SMART brlzneu 164 228 IPR004827 GO:0003700|GO:0006355
Gabi3659g00016 335 Coils Coil 226 246 - -
Gabi3659g00016 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 229 IPR004827 GO:0003700|GO:0006355
Gabi3659g00016 335 MobiDBLite consensus disorder prediction 101 151 - -
Gabi3659g00016 335 Coils Coil 177 218 - -
Gabi3659g00016 335 Pfam bZIP transcription factor 167 214 IPR004827 GO:0003700|GO:0006355
Gabi3659g00016 335 MobiDBLite consensus disorder prediction 101 165 - -
Gabi3659g00016 335 CDD bZIP_plant_GBF1 169 220 IPR045314 GO:0003700|GO:0006355
Gabi3659g00016 335 Gene3D - 167 223 - -
Gabi3659g00016 335 PANTHER BASIC LEUCINE ZIPPER 63 89 294 - -
Gabi3659g00016 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 171 186 IPR004827 GO:0003700|GO:0006355
Gabi3659g00016 335 FunFam BZIP transcription factor 166 217 - -
Gabi3659g00016 335 SUPERFAMILY Leucine zipper domain 168 218 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3659g00016 Gabi-Chr3659 123511 129024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3659g00016 79 335 bZIP Transcription Factor Family AT5G24800 47.794 3.27e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3659g00016 bZIP_1 1.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3659g00016 K25784 - gmx:778193 356.681