Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3659g00015 ATGGAACCTAAATGGGGCGGCGTTCTGGCGGCGCCGTCGATTTTCTCCAGCTTCGACGACTTGAAGTGGATCGCATCGGAGTTCGATCACGAGGAGTTCATGAAGCGCGTGACAGAAGTCGAAATAGCTAATGGATCGGCGAACGACGACGACGTGAAACCGTGCAAGATGGATCCGTTCATCAACGGCGGCGCATGCTCCGGCCAACTCAACGGCGCCGCCGTTGCTTCTTTCCCGAACCTGGATGCGGTGACTGCATTTTCAACTTGTGGTGAACTAACAGATAATACCATCGTCAGCTCGCAGAACCTCACTCCCAGGCATTCCCCCATTTCTCCAACTATTGATACTCAGTCATCCATTTGTGTTGGGAGCCCGGTTTCTGCCAATAAACCAAATGGCAGAGAGAATCAAGGAAAAGTAACCACTACAAGTGGTTCCTCACGTGAGCCATCTGATGAGGATTGTGAACAGAGCACAAACCCTTGTGACATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCAAGGAGATCCAGAAGAAGAAAACAAGCGCATTTGGCTGACTTGGAGTTGCAGGTTGAACAGATGAGGCTGGAAAATGCAACCCTATACAAACAGCTTACAGATGCTAGCCAACAATTTCGTGATGCTGATACGAATAACAGAGTGTTAAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAGTTAGCCGAGGATATGGTCACTAGGGGCTCTTTCAGCACCCTTAACAACCAAATTTTCCAGAATCAGAGTCAATTGAGCACTCAACCACAACTCAACACGAGTAATCAGCGATGCATGGCACATGTCTCGCCAACCATCACTGTCCCTGGGAATGATGCCTCATTTGGTGGACAGAATTCATCTCTTGGGCTTGGAAACTTGGAAACGTGGACAGAATTCAGTGATTTCAACAATGGAGTCATAAGTGATGCTGTGAGCTCTGTGACTAATGAAATATGGCCATAA 1002 0.48 MEPKWGGVLAAPSIFSSFDDLKWIASEFDHEEFMKRVTEVEIANGSANDDDVKPCKMDPFINGGACSGQLNGAAVASFPNLDAVTAFSTCGELTDNTIVSSQNLTPRHSPISPTIDTQSSICVGSPVSANKPNGRENQGKVTTTSGSSREPSDEDCEQSTNPCDMKRLRRKVSNRESARRSRRRKQAHLADLELQVEQMRLENATLYKQLTDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVTRGSFSTLNNQIFQNQSQLSTQPQLNTSNQRCMAHVSPTITVPGNDASFGGQNSSLGLGNLETWTEFSDFNNGVISDAVSSVTNEIWP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3659g00015 333 MobiDBLite consensus disorder prediction 101 149 - -
Gabi3659g00015 333 MobiDBLite consensus disorder prediction 150 164 - -
Gabi3659g00015 333 MobiDBLite consensus disorder prediction 101 164 - -
Gabi3659g00015 333 PANTHER BASIC LEUCINE ZIPPER 63 89 292 - -
Gabi3659g00015 333 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Gabi3659g00015 333 CDD bZIP_plant_GBF1 167 218 IPR045314 GO:0003700|GO:0006355
Gabi3659g00015 333 SUPERFAMILY Leucine zipper domain 166 216 IPR046347 GO:0003700|GO:0006355
Gabi3659g00015 333 Gene3D - 165 221 - -
Gabi3659g00015 333 Pfam bZIP transcription factor 165 212 IPR004827 GO:0003700|GO:0006355
Gabi3659g00015 333 FunFam BZIP transcription factor 164 215 - -
Gabi3659g00015 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Gabi3659g00015 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 227 IPR004827 GO:0003700|GO:0006355
Gabi3659g00015 333 Coils Coil 224 244 - -
Gabi3659g00015 333 Coils Coil 175 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3659g00015 Gabi-Chr3659 123508 129024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3659g00015 79 333 bZIP Transcription Factor Family AT5G24800 47.794 5.45e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3659g00015 bZIP_1 1.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3659g00015 K25784 - gmx:100776831 358.607